Flagellimonas alginolytica: ABTP35_11725
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Entry
ABTP35_11725 CDS
T11189
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
faj Flagellimonas alginolytica
Pathway
faj03030
DNA replication
faj03430
Mismatch repair
faj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABTP35_11725
03430 Mismatch repair
ABTP35_11725
03440 Homologous recombination
ABTP35_11725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faj03032
]
ABTP35_11725
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_11725
Enzymes [BR:
faj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABTP35_11725
DNA replication proteins [BR:
faj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABTP35_11725
DNA repair and recombination proteins [BR:
faj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABTP35_11725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo1
Rv2179c-like
T4_Spackle
Motif
Other DBs
NCBI-ProteinID:
XHB40666
LinkDB
All DBs
Position
2636004..2636777
Genome browser
AA seq
257 aa
AA seq
DB search
MQLQLTKPICFFDLETTGTNVAKDRIVEISILKVYPNGNKESKTWLVNPEMPIPAESEAI
HGISDEKVANEPTFKQLSKEIYAMIRDSDLAGFNSDRFDIPLLAEEMLRAGVDFDMKSMV
SVDVQTIFHKMEKRTLEAAYKFYCDKNLDDAHSAEADTLATYEVLLAQLERYPELENDIK
KLSEFTTRRQNLDFAGFIGLDENDNPIFSFGKHKGKTVDEVMEKEPGYFGWLLNADFPLY
TKKVLTQIKLSKLNNKF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacaattgaccaaacctatctgttttttcgatttggagaccaccggtaccaac
gtcgcaaaagatagaatagtagaaatttccattttaaaagtatatcccaatggaaataaa
gaaagtaaaacctggttggtgaacccggaaatgccaataccggcagaatcggaggccata
cacggaatatccgacgagaaggtggccaatgagcctacttttaaacaattgtccaaagaa
atttacgcaatgatccgcgatagcgatttagcggggtttaattccgataggttcgatata
ccgttattggcggaggaaatgttgcgtgctggggtggattttgatatgaagagcatggtt
tccgtagatgtacagaccattttccataaaatggaaaaaagaaccttggaagccgcctat
aagttctattgcgataaaaacctggacgatgcccacagtgcggaagccgataccctggca
acatacgaggtgttattggcgcaattggagcgttatccggaactcgaaaacgacataaaa
aaactatcggagttcaccacaagaagacagaatctggattttgcaggttttatagggctt
gatgaaaacgataaccctatattttcgtttggaaaacacaaaggaaaaaccgtggacgag
gtaatggaaaaagaacccggttactttggatggctcctaaacgcagatttccccttgtac
actaagaaagtgcttacccaaataaagttgagcaagctcaacaataaattttag
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