Flagellimonas alginolytica: ABTP35_15930
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Entry
ABTP35_15930 CDS
T11189
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
faj Flagellimonas alginolytica
Pathway
faj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
faj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABTP35_15930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faj03400
]
ABTP35_15930
Enzymes [BR:
faj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABTP35_15930
DNA repair and recombination proteins [BR:
faj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABTP35_15930
Prokaryotic type
ABTP35_15930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XHB41473
LinkDB
All DBs
Position
complement(3529422..3530087)
Genome browser
AA seq
221 aa
AA seq
DB search
MDVNIGPSWKIQLQKEFDKPYFKELTGFVKQEYQQYTCYPKDQEIFSAFNHFPFHETKVV
VIGQDPYHGPDQANGLCFSVKDGIPHPLSLMNIFKEINMDLGKPYPESGNLQRWADQGVL
LLNATLTVRAQQAGSHQKRGWEQFTDAVIKTVSNELEGVVFLLWGGFAKKKSSLIDTTKH
HILTSGHPSPLSANRGLWFGNQHFSKTNTLLARMGKTPIDW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaacattgggcctagttggaaaattcaacttcaaaaggagtttgataaacct
tattttaaggagttgaccggatttgtaaaacaggaatatcagcaatacacttgctaccca
aaggaccaagagattttttcggcttttaatcattttccgtttcacgaaaccaaggttgtt
gtgatcggtcaagatccttatcatggccccgatcaagccaatgggctgtgcttttcggtc
aaagacgggattccacatccgctatctttgatgaatatttttaaagagatcaatatggat
ttgggcaaaccttatccagaaagtggtaatctgcaacgttgggccgatcaaggggttcta
ttgttgaacgctacgcttacagtaagggcgcaacaggccggaagccatcaaaaaagaggt
tgggagcaatttaccgatgctgttattaaaacagtttccaatgagttggaaggtgttgta
tttttactttggggtggatttgccaagaaaaaatcatcattgatcgatacaacgaagcat
cacattttgacctccggtcatccatcgccattgagcgccaaccgtggactgtggttcggc
aatcagcatttcagcaaaacaaatacattattggcccgaatgggcaaaacgcccattgat
tggtag
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