Flavobacterium alkalisoli: FUA48_01015
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Entry
FUA48_01015 CDS
T06875
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fak
Flavobacterium alkalisoli
Brite
KEGG Orthology (KO) [BR:
fak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fak03032
]
FUA48_01015 (topA)
03400 DNA repair and recombination proteins [BR:
fak03400
]
FUA48_01015 (topA)
Enzymes [BR:
fak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FUA48_01015 (topA)
DNA replication proteins [BR:
fak03032
]
Prokaryotic type
DNA Topoisomerases
FUA48_01015 (topA)
DNA repair and recombination proteins [BR:
fak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FUA48_01015 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEE48204
UniProt:
A0A5B9FMB6
LinkDB
All DBs
Position
complement(269419..271914)
Genome browser
AA seq
831 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYQVESSYGHIADLPSKEIGVDVENGFKPKYEVSSDK
RALVKKLRDLSKSAETVWLASDEDREGEAIAWHLAEELKLDKNKTKRIVFHEITKTAIQK
AIENPRGINYDLVNAQQARRVLDRLVGYELSPVLWKKVKSGLSAGRVQSVSVRLIVERER
EIQNFKAEGSYSITAEFVNEAGKAFKARLPKNFNTKQEAQDFLNKNIGSIYKVSDLETKP
AKKSPAAPFTTSTLQQEAARKLYFPVGVTMMLAQRLYEAGLITYMRTDSVNLSQEAMTAA
EAEITKSYGKEFSRPRNYATKSKGAQEAHEAIRPTDMARHTVSLDRDQARLYDLIWKRTV
ASQMSDAQLERTNVRIDANNHKEVFAASGEVLLFEGFLKVYLEGNDDEDVEQEGMLPALR
LNEKLTNNYITATERFSRPPARYTEAALVKKLEELGIGRPSTYAPTISTIISRNYVEKGS
FEGQERKYAQLTLKEGSVAEQQLKENFGSDKGKLVPTDIGMIVNDFLVSHFETILDYNFT
AKVEQDFDEIASGNEDWTKMMNDFYSHFHPTVKDVEKNADRESGERILGVHPESGKQVSV
RLGKFGPMAQIGDAEDEEKQFASLLPEQNIGNITLEEALGLFMLPKSLGTYKGEEVEVNN
GRFGPYVRFGKTFISLPKGMDPMDVTFDVAGKLIAEKEQADAPIGTYKNEPVQKGVGRFG
PFIKWNGMFINVNKKYNFDNLSQADITELIEDKLQKDKDKVIHNWEDEGIKVEKARWGRS
VILKGKTKIELNKDVDASKLTLEQVKAMIEEKAPAKKTAAKKKTTAKTKKK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtgattgttgagtcgcctgcaaaggcaaaaaccattgaaaaattt
ttaggaaaagactaccaggtggagtcgagttatggacacatagccgatttaccatctaaa
gagataggggtagatgttgagaatggctttaagccaaaatatgaagtttcttccgacaaa
agggctttggtaaaaaaactcagggatctttctaaatctgcagagacagtttggctggca
agtgatgaggaccgtgaaggggaggctattgcatggcacttggcggaagaactgaaactt
gacaaaaacaaaaccaagcgtattgtttttcatgaaattaccaaaacagcgatacaaaag
gctatcgaaaacccaagaggtattaattatgaccttgtaaatgcacagcaggcaagaagg
gtgcttgaccgattagtaggttatgaactttctccggtactttggaaaaaagtaaaaagc
ggtttatctgccggtcgtgtacaatcggtttcggtacgtttaattgttgagcgtgaaaga
gagatacaaaactttaaggcagagggttcttactcaataactgccgagtttgtaaacgag
gcaggaaaagcatttaaggcaagactacctaaaaactttaatacaaaacaggaagcgcag
gatttccttaataaaaatataggttctatatataaggtgtcggatttggaaacaaaaccg
gcaaaaaaatcaccagcggcaccgtttactacatctacactacagcaggaagcggcaaga
aagctgtattttccggtaggtgttaccatgatgctggcacagcgcctgtatgaggccgga
cttattacttatatgagaacggatagtgttaacctttctcaggaagcaatgacagctgcc
gaggcagaaattacaaaatcatacggtaaggaattcagtaggcccagaaactacgctaca
aaaagtaaaggtgcgcaggaggctcacgaggctatacgtcctacagatatggcccgtcat
acggttagtttagacagggatcaggcaaggctttatgatttgatatggaaaagaaccgtg
gcttctcaaatgagtgatgcacagcttgaacgtaccaatgttaggatagatgctaataat
cataaagaagtttttgcagcatcaggagaggtgttgctgtttgaaggtttcttaaaagta
taccttgaaggaaatgatgatgaggatgtagaacaggagggtatgctgcctgcattacga
ctaaacgaaaaactgactaataattatattacggcaaccgaacgtttttcaagaccgcct
gcccgttatacagaagcggctttggttaagaaactagaagaacttggtattggtcgtccg
tcaacttatgcgcctaccatttctaccattatcagcagaaattatgttgaaaaaggaagt
tttgaagggcaggaaagaaaatatgcacagcttaccttaaaagaaggttctgttgcagaa
cagcagcttaaagaaaatttcggttcagataaaggtaagttagtgcctaccgatataggg
atgattgtaaatgatttccttgtaagtcatttcgaaactattcttgattataactttacc
gctaaagtagagcaggattttgacgaaattgcttcgggtaatgaagactggaccaaaatg
atgaatgatttttatagtcattttcatccaacggttaaggatgttgagaagaatgcagac
agggagtccggtgagcgtattcttggtgttcatcctgaatcagggaaacaggtaagtgtg
cgtttgggtaaatttggtccgatggctcaaattggcgatgcagaagatgaagagaaacag
tttgcaagccttttaccggaacagaatattggtaatattactcttgaagaagctttaggc
ttattcatgctgcctaaatcacttggtacttataaaggagaagaggttgaggtaaataat
ggccgttttggtccttacgttcgatttggaaaaacatttatttcgttaccaaaaggtatg
gatcctatggatgtgacttttgatgttgcgggaaaactgatagcggaaaaagaacaggct
gatgctcctataggtacttataagaacgaaccggttcaaaaaggagtagggcgtttcggg
ccgtttattaaatggaacggaatgtttatcaatgtgaacaaaaagtataattttgataac
ctttctcaggctgatataacagagcttatagaggataagctgcaaaaggataaagacaag
gttatacataactgggaagacgaaggtataaaagtagagaaagcccgttgggggagatcg
gttatacttaaaggaaaaaccaaaattgagcttaataaagatgttgatgcctctaagctt
acgcttgagcaggttaaggcaatgattgaagaaaaagctcctgctaaaaaaactgcagct
aaaaagaaaacaacagcaaaaacaaaaaagaaataa
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