Flavobacterium alkalisoli: FUA48_11835
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Entry
FUA48_11835 CDS
T06875
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
fak
Flavobacterium alkalisoli
Brite
KEGG Orthology (KO) [BR:
fak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fak03000
]
FUA48_11835
Transcription factors [BR:
fak03000
]
Prokaryotic type
Helix-turn-helix
Other families
FUA48_11835
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_2
AAA_3
AAA_7
AAA_19
AAA_16
GAF
HTH_8
AAA_22
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
QEE50242
UniProt:
A0A5B9FZ63
LinkDB
All DBs
Position
complement(2610506..2612065)
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AA seq
519 aa
AA seq
DB search
MTHSAENNEILKRIMQREQEQLLLLSLCESLAMAENRADLNQVVTQELKSKLGFEHFSLF
LQHQAKEGHVLFYSSEHPKFLRFKDEVLKTDFFDRVLGSPDPVLLPTPEIIKTGLQPIVG
DGYKNTIRKALFYTIPSKRFQAVLCLGYSKDGKTEREDLRLVRQLCNQLTITLTNILLLE
RHISVNDPKNQLTQDEKTPVSSQHMAIEGDSAPMQKVRTLISLVSPSDTGVLILGESGTG
KELVARAIHENSDRKNKNLVKINCAAIPGNLLESELFGHEKGSFTGAISQKKGKFEIAHN
GTLFLDEIGELPMDLQVKLLRTLQEKEIERIGGHKAIAVNVRIIAATNRDLQQEIAKGNF
RKDLYYRLNIFPIYIAPLKERKEDVKSLAKFFVQRFCIKNKQNVKTISAKAMRSLEMHNW
PGNVRELEHTIERAVLLSPEKTITEIEVSSYTDTVHTTDNNTVIKSWREFERDYLLSVLK
FCKGRISGDNGAAALLDLPSTTLKSRMDRLGIKKRHYLS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagtgcggaaaataacgagatactaaaaaggatcatgcagcgtgagcaggaa
cagttgctactgctgtcactatgcgaaagccttgccatggccgaaaacagggctgattta
aatcaggttgtaacccaggaactgaaatcaaaactggggtttgaacatttctcactgttt
ctccaacaccaggctaaagaaggtcatgttcttttttacagcagtgagcaccctaaattc
cttcggtttaaagacgaggtgctcaaaaccgatttttttgacagggttttaggttctccc
gatcctgtactactaccaacaccggaaataatcaaaacggggctacagcctattgtgggt
gatggttataaaaacaccatcagaaaggctttattttacactattccctcaaaaagattt
caagccgtactatgccttggttacagtaaagacgggaagaccgaacgggaagacctgcga
cttgtaagacaactttgtaaccagcttactataaccctaaccaatatccttttactggag
aggcatatctccgtcaatgatcctaaaaatcaattgacacaagatgaaaaaacgcctgtt
tcaagccagcatatggctattgaaggagacagtgcgcccatgcaaaaggtacgtaccctg
atcagtttggttagccctagtgacaccggagtcctgatactcggtgaaagtggtaccggt
aaggagcttgtagcaagggccatacacgaaaactcggataggaaaaacaaaaatcttgtc
aaaataaactgtgctgccatccccggaaatttattggaaagcgaattgttcggccatgaa
aaaggcagttttacaggtgccatttcccaaaagaaaggaaagtttgaaatagcccacaac
ggtacgcttttccttgacgagatcggggaattgccaatggatcttcaggtaaaactatta
aggacattacaggaaaaggaaattgaacggataggaggacataaagccatagcagtaaat
gtgcgtataatagccgccactaacagggatttacagcaggagatcgctaaaggaaatttc
aggaaggacctttactacaggcttaacatttttccaatttatatcgcccccctgaaagaa
cggaaagaagatgtaaaaagcctggcaaagttttttgtacagcgtttctgtatcaaaaac
aaacagaatgtaaaaaccatttcagcaaaggcaatgagaagtcttgaaatgcataactgg
ccgggtaatgttcgcgaactggagcataccatagagcgtgccgtacttttgtctcccgaa
aaaacaattacggaaatagaagtatcctcctataccgatacagtgcatactactgacaat
aatacagtcataaaatcatggcgtgaatttgaaagagactatctcctgagtgtgcttaag
ttttgtaaagggcgcatatcaggcgataacggtgctgctgcccttctcgaccttccttcc
actaccttaaaatcaagaatggacaggctgggcatcaaaaaaaggcattacctgtcttaa
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