Flavobacterium alkalisoli: FUA48_13220
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Entry
FUA48_13220 CDS
T06875
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
fak
Flavobacterium alkalisoli
Pathway
fak03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FUA48_13220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fak03400
]
FUA48_13220
DNA repair and recombination proteins [BR:
fak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FUA48_13220
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
DUF4911
PAS_3
Motif
Other DBs
NCBI-ProteinID:
QEE50499
UniProt:
A0A5B9FW59
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All DBs
Position
complement(2891630..2892412)
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AA seq
260 aa
AA seq
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MKALWKGSISFGLVNIPVRLYSGTSPHRIDLDMIRQKDQCPIQYVRVCKKDGKEVPWDEI
AKGYRKENGDYVVLDKDDFKKASPEKTQTIDIFEFIKEEEIPSKYLEKPYIIEPAKEAKK
VYALLREALKKSEKVGLCKFIMRTTEHLGILKVEDNVILLIQIRFNDELRDPGDAKIPSN
IKITKKELDMALSIIDQLTDKFEPAKYKDTYKAELIKMIKKKATAKSETKEPAPRKRRKT
TAAKDDLLEQLKASLAAIKN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactatggaaaggaagcatcagttttgggttagttaatattcccgtaagatta
tatagtggtaccagtccgcacaggattgatttggatatgataaggcaaaaagaccaatgc
cctatccaatatgtgcgtgtttgtaaaaaagacggtaaggaagtgccgtgggacgaaatt
gccaaaggctacagaaaagaaaacggagattatgtcgttttagataaggatgactttaaa
aaagcttcacccgaaaaaacacaaaccatagatatctttgaatttataaaagaagaggaa
atcccttctaaatatctggaaaagccctatataatagaacctgctaaagaagctaaaaaa
gtatatgctctgcttagggaagcacttaaaaaatcagaaaaagtgggtctctgcaagttt
attatgcgtactaccgaacacttgggtatattaaaagttgaagataatgttatactttta
atacaaatacgatttaatgatgagctaagggatcccggtgatgcaaagataccttcaaac
attaaaatcactaagaaagagctggacatggctctctccattatcgatcagcttacagat
aagtttgaaccagctaagtataaggacacatataaggctgaacttataaagatgattaaa
aagaaagctactgcaaaatccgaaactaaagagcctgcaccaagaaaacgaagaaaaacc
acagccgcaaaagatgatttgctggaacagcttaaagcaagcctggcagctattaaaaac
taa
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