Flavobacterium alkalisoli: FUA48_13930
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Entry
FUA48_13930 CDS
T06875
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fak
Flavobacterium alkalisoli
Pathway
fak03030
DNA replication
fak03430
Mismatch repair
fak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FUA48_13930 (holA)
03430 Mismatch repair
FUA48_13930 (holA)
03440 Homologous recombination
FUA48_13930 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fak03032
]
FUA48_13930 (holA)
03400 DNA repair and recombination proteins [BR:
fak03400
]
FUA48_13930 (holA)
Enzymes [BR:
fak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FUA48_13930 (holA)
DNA replication proteins [BR:
fak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FUA48_13930 (holA)
DNA repair and recombination proteins [BR:
fak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FUA48_13930 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
CBF
SUKH-3
Motif
Other DBs
NCBI-ProteinID:
QEE50636
UniProt:
A0A5B9FXI3
LinkDB
All DBs
Position
complement(3044355..3045359)
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVVKIVNDIKQGNIKPIYFFMGEEPYYIDRLTEYIEDNILSEEEKGFNQMVLYGKDVS
IEDIMSSARRYPMMAERQVVIVKEAQELSRTIDKLEAYAQNPQPTTVLVFAYKYKTLDKR
KKVTKLLDKAGLVYESKKLYENQVADWIKRVLSGKGYTIEPKAAAMLVEFLGNDLSKINN
EIEKLLIILPKGSNITPKSIEDNIGISKDYNVFELRKAIGERDQLKAYKIAGHFSQNPKD
NPLVMTTGLVFGFFSQLLQYHGLKDKSPGNAAKMLKVNPYFVKDYDIALRNYPMKKVSSI
VNALRDIDVKSKGVGANAISQADLLKEMLVKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaagtagtaaaaattgttaacgatataaaacagggcaacataaagcccatttat
ttttttatgggtgaagagccgtactatatagacaggcttaccgaatatattgaagacaac
atacttagtgaagaggagaaaggttttaatcagatggtgctttatggtaaggatgtaagt
attgaagatattatgtcgagcgccaggagataccctatgatggccgaaagacaggtagtg
atagtaaaggaggcccaggaactttccagaactattgataagcttgaagcttatgcacaa
aatccgcagcctacaacagttttggtatttgcttacaagtataaaactctggataaacgt
aaaaaagttactaaacttttagataaggccggactggtttatgaaagtaaaaagctttat
gaaaaccaggtagccgactggattaaaagagtgctttcgggtaaagggtatacaattgag
cccaaggctgctgcaatgcttgtggagtttttaggtaatgacttaagtaagattaacaat
gagattgaaaagctgttaataatacttcctaaaggcagcaacataactccaaagagtatt
gaggataatattggaataagtaaagactataatgtttttgaacttagaaaagccataggg
gagagggatcagttaaaggcatataaaatagccggtcatttttctcaaaaccctaaggat
aatccattggttatgactacaggtttggtatttggtttcttttcgcaactactccaatat
cacggattaaaagataaaagtcccgggaatgctgcaaaaatgcttaaggttaatccttat
ttcgtgaaggattatgatatagcacttcgtaattatcctatgaaaaaagttagcagcata
gttaatgctttacgtgatatagatgtaaaaagtaaaggagtaggggctaatgccatatct
caggctgatttacttaaagagatgcttgtaaaaatatttaattaa
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