Frankia alni: FRAAL0198
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Entry
FRAAL0198 CDS
T00384
Name
(GenBank) putative transcriptional regulator
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
AAA_22
AAA_16
NB-ARC
TPR_12
nSTAND1
Sigma70_r4_2
TPR_MalT
HTH_38
NACHT
ATPase_2
HTH_23
Sigma70_r4
TPR_16
nSTAND3
Fungal_trans_2
TsaE
AAA
TPR_4
Motif
Other DBs
NCBI-ProteinID:
CAJ58876
RhizoBase:
FRAAL0198
UniProt:
Q0RU68
LinkDB
All DBs
Position
193282..195591
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AA seq
769 aa
AA seq
DB search
MTCSPVPADLTRFVGREQECVQIAELLSCSRLMTLTGPGGVGKTRLAKEVLRRQAGDLVD
SVVFVELAEVAHGDQVTAAIAAALGLALDSGGESLPSLGRALQERDILLVLDNCEHLLAA
CGRLMGALLPAAPGVRVLATSREPLGIFGERTWRVPPLSLPAPSSNSAADSDAVKLFLDR
ALSVAPDFVVTADRLRMVGELCRRLDGIPLAIELAAVRTRSFDLPQMLSDDVPIFRVLDR
GNEAGPLRHHTLRKAIEWSHDLCTPQEQALWSRLAIFSGSFSLAAAREVCAGDGLTGDEI
VPLIGNLVEKSVVTCNVIEAAPRYRLLESLRVFGLERCEQVETWRRRHRDHYLGLALEST
HTSTGDEQLVTVRRLQGELPNIRSAVGYSLSRSSERLIGLEMTGALWFYWNACGHLRDGC
RWLQRALAENPESTPARAKALWVLGWYEMVQGDKANARLHLEAARDMGRAIGDASAAATA
MQFLGTLEELDGNSEGALLLLEDAQRRHRKAGEDGALSILCGAQLAMLHTLAGRIDEGRR
QCDVAVAQAEAHDERWAASWAHWNRGLVHHFAGEPARSVESLRIALTAKASLRDWLGASA
CVEVMVWDAVDLGRLEYAARLLGIGRMLCRAMGGRQPLFGSAFLTARRAEYVEGIRHATG
VENFQREFAAGLALDIEEAIDFVLDMSSVRASLTVPPDRSHGDALTAREREISRLIYQGL
SNADIAGSLTISRRTVEGHVNRILAKLNFRSRSQVAVWMARREPVESGR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacatgttctcccgttcccgccgacctcacccgcttcgtgggccgggagcaggagtgc
gtccagatcgcggagctcctgtcctgctcgcgactgatgaccctgaccggacccggcggg
gtgggaaaaacccgattagccaaagaggtgctgcgccggcaggcgggcgacctggtggac
tccgtcgtcttcgtcgagctcgccgaggtcgcccacggcgaccaggtcacggcggcgatc
gccgcggcgctgggcctggcgctggacagcggcggcgaatcgctgccgagcctgggccgg
gccctccaggagcgcgacatcctgctggtactcgacaactgcgagcacctcctcgccgcg
tgcgggcggctgatgggcgccctgctgcccgcagcgcccggggtcagggttctcgcgacg
agtcgtgagccactcggcatcttcggcgagcgcacctggcgggttcccccgctgagcctg
ccggcgccgtcgtcgaactccgctgccgacagcgatgccgtgaagctcttcctggaccga
gcgctgtcggtcgcaccggacttcgtggtcaccgccgaccggctccggatggtgggtgag
ctctgccgccgcctcgacggcatccctctcgccatcgagctggccgcggtccgcacgcgc
tccttcgatcttccgcagatgctgtcggatgacgtgccgatcttccgcgtgctcgaccgg
gggaacgaggctggcccactccgccaccacaccctgcgcaaggcgatcgagtggagccac
gatctctgcacgccccaggagcaggccttgtggagccggctggcgatcttcagcgggtcc
ttcagcctcgccgccgcccgggaggtgtgtgccggtgacggcctgaccggggacgagatt
gttccactgatcgggaatctggtggagaagtcggtcgtaacctgcaacgtgatcgaagcc
gccccacgctaccggcttctggaaagcctgcgcgtcttcgggctcgagcgttgtgaacag
gtggagacgtggcgtcgtcggcaccgcgaccactatctcggtctggcgctggaaagtacg
cacacctcgaccggggacgagcagctcgtcacggtccggcggcttcagggtgagcttccc
aacatccgctccgccgtcggctactccctctcgcggagctcggagcggctgatcggcctc
gagatgacgggtgcgctctggttttactggaatgcctgtggccacctgcgtgacggctgt
cgttggttacaacgcgcgctcgcggagaatcccgagtcgacgccggcgcgcgcaaaggcc
ctgtgggtgctcgggtggtacgagatggtccagggagacaaggccaacgctcggcttcac
ctggaggcggcccgggacatgggtcgggcgatcggtgacgcctcggcggccgcgaccgcc
atgcagttcctcggcacgctcgaagagctggacgggaactccgagggcgccctgctgctg
ctcgaggacgcccagcgccgccaccggaaggccggagaggacggggcgctgagtatcctc
tgcggcgcccagctcgcaatgctccacactctcgccggccggatcgatgaagggcggcga
cagtgcgacgtggcggtggcccaggcggaagcccacgatgagcggtgggcggcctcctgg
gcgcactggaaccgcggactggtccaccacttcgccggagagccggcacgttccgtcgag
tcactgcgtattgccctcaccgccaaggcatccctgcgtgactggctgggcgcttcagcc
tgcgtcgaggtcatggtgtgggacgcggtcgacctgggacggctggagtacgccgcccgg
ctgctcgggattggtcgcatgctgtgccgggccatgggcgggcgacagcccctgttcgga
tcagcgttcttgacggcgcgacgggcggagtacgtggaaggcatccgtcatgcgacggga
gtcgagaactttcagcgtgagttcgccgcggggctcgccctggacatcgaggaagccatc
gacttcgtcctggacatgtcgtcggtccgggccagtctcaccgtcccgccggaccgctcg
cacggcgacgcgctgaccgctcgcgagcgggagatcagccgcttgatttaccaggggctg
agcaacgccgacatcgccgggtcgctcaccatttcgcgacgcaccgtcgagggccacgtg
aaccgaatcctggccaagctgaacttccgctcccgctcccaggtcgccgtgtggatggca
cgccgagagccggtcgagtccgggcgttag
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