Frankia alni: FRAAL0336
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Entry
FRAAL0336 CDS
T00384
Symbol
ddpD
Name
(GenBank) ABC transporter ATP-binding protein.
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
fal
Frankia alni
Pathway
fal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRAAL0336 (ddpD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fal02000
]
FRAAL0336 (ddpD)
Transporters [BR:
fal02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FRAAL0336 (ddpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
nSTAND3
AAA_29
ATP-synt_ab
nSTAND1
DUF87
FtsK_SpoIIIE
Pyocin_S
Motif
Other DBs
NCBI-ProteinID:
CAJ59012
UniProt:
Q0RTT6
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All DBs
Position
complement(363171..365054)
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AA seq
627 aa
AA seq
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MPADDPLLVVEGLSVTFDARSAHPVRAVRDVSFTLRRGECLAIVGESGSGKSVTARTLVG
LTGARATVSARRLGFAGEDLTRVREASWRRIRGRHIGLVLQDALVSLDPLRTAGAEIAEA
LRTHRVVDRAGVHSRVLSLLTDVGVPEPAQRAAQYPHQLSGGLRQRALIASALAAGPELL
VADEPTTALDVTVQAQVLDLLRGLTAEGMSVLLISHDLAVVAGLADQVAVMYGGLVVEQG
PTATVLADPRHPYTQALLAAVPAMHAKGTRLSITPVDRPPATAGCPYAARCPRSDERCRA
ELPSPADDEHTHRTLCWHPGPPPPTTAPAAAPSTPAATVTSTASAADRALVATTAAPVAG
ADRPGRGADAGPLVEVTAINQRFRSPDGSWRHAVRDVSFELFAGETLGVVGESGSGKTTV
ARIVLGMQAPDSGTVRFAGAPWSGLPERRRRALRPRIQAVYQDPLGSFDPRFTTERIIGE
ALGAAGVGRGQQRRDRVVDLLERVGLAAGLLRRRPPELSGGQRQRVAIARALATEPELLV
CDEPVSALDVSVQAQILDLLAGLQQDLGVAMLFISHDLGVIHHISDRLVVMKDGLVVETG
PVGQVFAQPAQEYTRTLLAAVPRPDLT
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcggatgaccccctgctggtcgtcgaggggctcagcgtgaccttcgacgcgcgg
tccgcccaccccgtccgggcggtgcgggacgtgtcgttcaccctgcgccggggcgagtgc
ctcgccatcgtgggggagtccgggtccggcaagagcgtcaccgcccggacactcgtcggg
ctgacgggtgcccgcgcgacggtcagcgcgcgacggctgggcttcgccggcgaggacctg
accagggtgcgcgaggcgtcgtggcggcgcatccggggacggcacatcggcctggtgctc
caggacgccctggtctccctcgacccgctgcgcaccgccggcgcggagatcgccgaggcg
ttgcgcacccaccgggtcgtcgaccgcgccggcgtccactcccgcgtgctgagcctgctc
accgacgtcggcgtgcccgaaccggcccagcgggcggcgcagtacccgcaccagctctcc
ggcggcctgcgccagcgcgcgctgatcgcctcggcgctcgccgccggcccggagctgctg
gtggccgacgagcccaccacggccctcgacgtcaccgtgcaggcgcaggtgctcgacctg
ctgcgcggcctgaccgcggagggcatgtcggtcctgctgatcagccacgacctcgccgtc
gtcgccgggctcgccgaccaggtggcggtcatgtacggcgggctggtcgtcgagcagggg
ccgaccgcgaccgtgctggccgacccgcgtcacccgtacacgcaggcgctgctcgccgcc
gtgcccgcgatgcacgccaagggcacccggctgtcgatcacgccggtcgaccgcccgccg
gccaccgccggctgcccgtacgcggcccgctgcccgcgcagcgacgagcgctgccgcgcc
gaactgccgtcgccggcggacgacgagcacacccaccggacgctgtgctggcatcccggt
ccgcccccgcccaccacggcgccagccgccgcgcccagcaccccggcggccaccgtcacc
tccacggcttcggcggccgaccgggccctcgtcgccacgacggccgcgccggtggcaggg
gcggaccggccgggacggggggccgacgccggtccgctcgtcgaggtgaccgcgatcaac
cagcggttccgctcccccgacggatcctggcggcacgccgtgcgggacgtgtcgttcgag
ctgttcgccggggagaccctcggcgtggtcggcgagtccggctccggcaagacgaccgtg
gcccggatcgtgctggggatgcaggccccggactccgggacggtgcggttcgccggcgcg
ccctggagcgggctgccggaacgccggcggcgcgccctgcggccacgcatccaggccgtc
taccaggatccgctcggatcgttcgacccgcggttcaccaccgagaggatcatcggtgag
gcgctgggcgcggccggggtgggccgcgggcagcaacgccgtgaccgggtcgtcgacctg
ctcgaacgggtggggctggccgccggcctgctgcggcggcgaccaccggagctctccggt
ggtcagcggcagcgggtggccatcgcgcgggccctggccacggagccggagctgctcgtc
tgcgacgagccggtctccgcgctcgacgtctcggtccaggcccagatcctcgacctgctc
gccgggctccagcaggatctcggcgtcgccatgctcttcatctcccacgacctcggcgtc
atccaccacatcagcgatcggctggtggtgatgaaggacggcctggtcgtcgagaccgga
ccggtcgggcaggtcttcgcccaaccggcgcaggagtacacccggaccctgctcgccgcc
gtgccccggcccgacctcacttga
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