Frankia alni: FRAAL0612
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Entry
FRAAL0612 CDS
T00384
Name
(GenBank) DNA polymerase III subunit gamma (partial match)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fal
Frankia alni
Pathway
fal03030
DNA replication
fal03430
Mismatch repair
fal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRAAL0612
03430 Mismatch repair
FRAAL0612
03440 Homologous recombination
FRAAL0612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fal03032
]
FRAAL0612
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL0612
Enzymes [BR:
fal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRAAL0612
DNA replication proteins [BR:
fal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FRAAL0612
DNA repair and recombination proteins [BR:
fal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FRAAL0612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
Rad17
AAA_16
AAA_30
nSTAND3
Mg_chelatase
AAA_19
AAA_5
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CAJ59286
UniProt:
Q0RT17
LinkDB
All DBs
Position
complement(671002..674052)
Genome browser
AA seq
1016 aa
AA seq
DB search
MSTALYNRYRPATFAQVVGQEHVTDALRKALRTGRLHHAYLFSGPRGCGKTSSARILAAS
LNCEQGPTPEPCGVCDECVGIRTGASMDVTEIDAASHGLVDDARDLRERAFFAPASARFK
VFVVDEAHMVTAAAFNALLKVVEEPPPYLKFVFATTEPDKVIPTIRSRTHHYAFRLVPPG
VLRTHLASICEQEGVTVDPTVLPLVVRAGAGSVRDSLSVLDQLLAGADDDGLHYDRAVAL
LGMTDGVLLDETVDALARHDGAALFTVVDKVVSAGHDPRRFATDLLDRLRDLIIMAAVPD
ADARGLLESFSPDQIDRMRAQAAAVGPAELSRTADVLHGGLVEMRGTTSPRLMLELILAR
ALLPAASADPAALLTRLERLERRSVLAAPDSAAAHPASAPGFGPDPAAGSSPFGGVNGPD
GPRGMPGPPGPDEAAAPARTASPARPAPAHSARAAAAPASQGPASGSWDAAPVGSGAGPG
APTGGAGYGGPPPAGAGFGPQPGAGGGPGARQGAGTGQGAGAGQGPGTGQGAGARHGLGA
GQSAGAGQGAAAGQGGGVGPGGGRIDAAGLRMLWDEVLQLASRRSRKTHAILKDHATVAD
VRGDEVVLAFASPTMGRMFGQGNNAEVFCTALAEKIGGTWRVSVGPAGGSGPGRGGGRPV
GGPPPGGGFGGQPGSGPAWAGPDQRFGGGGPAPAAGGRAGGPAPGQPGPGQPVSGHWQGP
GGGSHPDQQDHSGHARPGEGPGGVDAGGRPPAPTGWAPGPGGGVPRADDGDAGRATGAHG
PVGGPGEGGPGQGGPGQGVADDGWRGRGGESGGDHHLGRRSDNTRFPEPTPPTHEHLEDG
GSGTYYGDRGQGSGDAHGIVEQRGAGAHAAGQNSTGRNGAGPNNAGPNSLGRNGVAQNST
DWNGARHHVGVHRAADQGAAAQGAAGQGAGGGGAAARGGAGWAGGGEGGAGPIGVGGHGS
AGGGGTRAAPPVNDEPSLDDDDAPGQVGGARGGAEAAMSLLRTGLGATVIEQIPTS
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagcgttgtacaaccggtaccgtcccgcgaccttcgcccaggtcgtcggccag
gaacacgtgaccgacgcgctgcgcaaggctctgcgaaccggccggctgcaccacgcgtac
ctgttcagcggcccgcggggctgcggcaagacgtcctcggcccggatcctcgccgcctcg
ctgaactgcgagcagggccccacccccgagccctgtggcgtatgcgacgagtgcgtcggc
atccgcaccggcgcctcgatggacgtcaccgagatcgacgcggcctcccacggcctcgtc
gacgatgcccgagatctgcgcgaacgggccttcttcgcccccgcgtcggcccggttcaag
gtgttcgtggtcgacgaggcgcacatggtgacggccgcggcgttcaacgccctgctgaag
gtcgtcgaggagccgccgccgtacctgaagttcgtcttcgccaccaccgagccggacaag
gtcatcccgacgatccggtcccgcacccaccactacgccttccggctcgttccgccaggc
gtgctgcgcacgcacctggcgtcgatctgcgagcaggagggcgtcaccgtcgacccgacg
gtgctgccactggtcgtgcgggccggagcgggatcggttcgggactcgctgtccgtcctc
gaccagctcctcgccggggcggacgacgacggtctgcactacgaccgcgcggtagccctt
ctcggcatgaccgacggggtcctgctcgacgagaccgtcgacgcgctcgcccggcacgac
ggcgccgccctgttcaccgtcgtcgacaaggtcgtctccgccggccacgacccgcggcgc
ttcgccaccgacctgctcgaccggctccgcgacctgatcatcatggcggccgtcccggac
gccgacgcccgcgggctgctggaatccttctccccggaccagatcgaccggatgcgcgcg
caggccgccgcggtcggccccgcggagctgtcccgcacggcggacgtgctgcacggcggc
ctggtcgagatgcggggcacgacgagcccacggctgatgctcgagctgatcctcgcccgc
gcgctgctgcccgcggcctccgcggacccggcggcgctgctgacccggctggaacggctg
gaacgccgttccgtgctcgccgctcccgactcggcggccgctcacccggcctcggcgccc
ggcttcggcccggacccggcggcaggcagttccccgttcggcggtgtcaacggcccggat
ggcccgcgtggcatgcccggcccgcctggcccggacgaggcagcggcccccgcacggacg
gcgtcgcccgctcggccggcacccgcccactcggcacgcgccgccgcggctcccgcttcc
caggggccggccagcggatcgtgggacgcggctccggtggggagtggcgcgggaccgggt
gcaccgaccggcggagccggctacggcggaccgccgccggcaggcgccggtttcggcccg
cagcccggagccggcggcggccccggggcgaggcagggcgcagggaccgggcagggtgcc
ggagccgggcagggcccaggaactgggcagggtgccggggccaggcacggtcttggcgcc
gggcagagtgccggtgccgggcagggcgctgcggctgggcagggcggcggggtcggtccg
ggcggcgggcggatcgacgccgctggcctgcggatgctgtgggacgaggtcctccagctc
gccagccgtcgcagtcgcaagacgcacgcgatcctgaaggaccacgcgaccgtcgccgat
gtgcgcggtgacgaggtggtgctcgccttcgccagccccacgatgggacggatgttcggg
cagggcaacaacgccgaggtgttctgcaccgccctggccgagaagatcggcggaacctgg
cgagtcagcgtggggcccgcgggaggctccggtcccggacgcggcggcggccgaccggtc
ggggggccgccgcccggcgggggcttcggtggccagccgggatcaggacccgcctgggcc
ggcccggaccagcgcttcggtggcggtgggccagccccggcggcgggcggccgagccggt
gggcccgctccaggccaacccgggccagggcaacccgtgtcggggcactggcaggggccg
ggcggcggaagtcacccggaccagcaggatcactcgggtcacgcgcgccccggagaggga
cctggcggcgtggacgccggcggccggccgcccgccccgacgggctgggcgcccggtccg
ggcggtggcgtgccgcgcgccgacgacggggacgccggtcgggcgaccggcgcacacggc
cccgtgggcggacccggggaaggcggacccgggcaaggcggacccgggcaaggcgtggcc
gacgacggctggcgcggccgtggtggggagtcgggcggggatcatcacctgggccggcgc
agcgacaacacccgattccccgagcccaccccgccgacccacgaacacctcgaggacggc
ggcagcggtacctactacggcgaccgcggccaggggtccggtgacgcccacggcatcgtc
gaacagcgcggggccggtgcgcatgcagccggccagaacagcacgggccgtaacggcgcc
ggaccgaacaacgccggaccgaacagcttgggccggaacggcgtcgcgcagaacagcacc
gactggaacggcgcgcgccaccatgtcggcgtgcaccgtgccgcggatcagggcgccgct
gctcagggcgccgccggtcagggcgccggcggcgggggtgccgcggcgaggggtggcgcc
ggttgggcgggaggtggcgagggcggcgctggcccgatcggggtcggcgggcacggttcg
gcggggggtggcggcacgcgcgccgcgccgccggtcaacgacgagccgtccctcgatgac
gatgatgccccggggcaggtgggcggggcccgcggcggtgcggaggcggcgatgtccctg
ctgcggaccgggctcggcgccacggtcatcgaacagatcccgacaagctga
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