Frankia alni: FRAAL0890
Help
Entry
FRAAL0890 CDS
T00384
Name
(GenBank) hypothetical protein; putative membrane protein
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
BTAD
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
CAJ59556
RhizoBase:
FRAAL0890
UniProt:
Q0RSA8
LinkDB
All DBs
Position
complement(955919..960916)
Genome browser
AA seq
1665 aa
AA seq
DB search
MPSGPTTPLARHARAPDPAPDRGRTMSTTPLPSAPSPSHPPDPTGTPPSVPESAVRPGTP
QPDAKRRRGPAARGAAGRRATGGEAVPTRQAVPTRQAVPMVPPEDRARERLQAAGALAAI
TVAVLGIPVVLALVLGPPIRSGSGAGGVVRAILSLLFWAAWAHFIACLVAEWRAEVRGSG
LAPRIPFGGAPQMLARRLVVTALLLSGTTALVVPATYGQETARGQRPGPGGVLRGMPAPG
PRPELAPPRVADGTGLRDGTTNGLDGPGAPDHPDSPDHPDTPDGVGSTAQASRSWATLPV
SPAARPTWALDGASPRAGVSPPDELPGDGGYEHAPYPGDRYGDVADPDGLDGTGPDGTGP
DGVGPDGVGRSDGVAGADRVGRLAGVRTAEFAGPVLPAQQPVAGQDELPPPWPGDRPELI
SPAADQHSRLVLGERMVKLYEVRPADGRHHDTLWGIAERFLGDGLRYREIFDLNEGRTQP
DGRTLSKPSLIHAGWVLLLPADAQGDGLRVLRMPEGTAEWPQVAADPAGDGELAELFDHD
SFGDAADADDDAAFEAWPGAADDRYTAHDRDTADDRQTAGDRYAPDNPFASSRLPSGPDA
PEQAAGPMLAASLAPPQDFLGVAAAGLLAAGVMVALSGRRSGPAQPPQDATERALLLASD
TEAARFIDRSLRVLSAALTEQARLLPAVYAAILTEDALILHMAPAQEEPPPPPWAVGEVP
GSWWIERTPELLAVSGDGSFAQPVLGVPAPFPALVSFGHDDAGSRILVDLEGAPGVISLL
GDRVIAMQVVIAVALELATNVWSDDLRVCLIGFPADDDLDELLTIAPERLWTAVSVAEAL
DELSGPDDEDAVLDVGAYGDDFPLEAGQRIAGNPGALAPDLLVLAEPPAEADIARLARMA
QGRRHAVGVLTVGDSPAARWRFTVGPDRRMSLGVLGVEVWAQSISGPECRAIAALFRAAD
AATVPAPAGPAEDEPPPQATPAPASSIAAPPAPPPLPPPAMTDPARAVGAAQADPGEAVP
APAQPTPDDEITRPPARADSVPGVLPWTPPLAAIPPATGSQASAPASADEDLTRPPANGR
RAPLGPPPVPLISPGGPASPERAASPHSAASDAEPAPGRVTPSAPAPTPFLAAPGDAGPH
DTDAMLLSHPSSPLIRPTDIPRVPPVLYFETPRMRANRAAQAQPQAPAARGAQTAGAATP
SPPPPPPPPPPAATVPGASPPPGTAPTATALPASVPQPAAPAPATAMPGTPLGSTRSSIP
PERVPTPPRPTPSPPAAPPPRPPIPPPNERPSGRYPTAAPPREPSSAPPEHSGPPSGQIA
RPQPPVSYSDGETTTPRGRTWQAGPVPPSPGTAPPSVGPPSAGPASAGPATAGPATAGPA
TAGPATAAPEPPSATGLRPVRESRPDEPMATGEAQVRVLGVPTVEGPGRQPTDDLDLLTE
IAVYLALHREGAHRRLLAEEIWPADAEADDDAVDAALGEARRWLGADVEGRPRLSVDPQG
RWRLSSDVRCDWELFVAYTHRAGMPGGDTEADLTTALRMVSGPLWTNLPTGRYRWATTGP
IARSTRAGVVDVAHRLAELTLGFGDTMTAMAACRTGLRAVPASEALWRDLLRTVSARGDR
RTLEAVTTEMYRTIGAGGGRRGGRAEAETDALVQTLLPGFRRARK
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcggaccgacgacgcccctcgcccggcacgcacgtgcgcccgaccctgcgcct
gatcggggacgaaccatgtcgaccacaccgttgccctcggcaccgtcgccctcgcatccg
cccgaccccacgggcaccccaccgtccgtgccggaatccgccgtgcggccaggcacgccg
cagccggatgcgaagcggcggcgtggcccggccgcgaggggtgcggccggccggcgcgcc
accggcggcgaggcggtgccgacccggcaggcggtgccgacccggcaggcggtgcctatg
gtcccgcccgaggatcgcgcgcgcgagcggctgcaggcggcgggcgcgctcgcggcgatc
acggtggcggtcctcggcatccccgtggtcctcgcgctggtgctcggtccgccgatccgg
agcggcagcggggcaggcggggtcgtccgggccatcctttccctgcttttctgggcggcg
tgggcgcacttcatcgcctgtctcgtcgcggagtggcgcgcggaggttcgcggcagcggt
ctggctccgcgcattccgttcggcggtgccccccagatgctcgcccgccgcctcgtcgtc
accgcgttgctgctctcgggcaccacagccctcgtggttccggcgacctacgggcaggag
acggcacgtgggcagcgccccggaccaggcggggtgctgcgagggatgcccgcaccgggt
ccgcgcccggaactggcgccgccccgggtcgcggacgggaccggcctgcgggacggcacc
acgaacggcctggacggacctggggcccccgaccacccggattcgcccgaccatccggac
acgcccgacggcgttggttcaacggcccaggcctcccgcagttgggccaccctgcccgtc
tcacctgccgcgcgccccacctgggccctcgatggagcctcgccgcgtgctggcgtctcg
cctcctgacgagctcccgggcgacggcggatacgaacacgctccctatcccggcgaccgg
tatggcgacgtggccgatcccgacggtctggacggcaccggcccggacggcaccggcccg
gacggcgtcggcccggacggcgtgggtcgttcggacggtgtcgctggcgctgaccgtgtc
ggtcgcctggccggggtgcggacggcggagttcgcagggccggttctcccggcgcagcag
cctgtcgccggtcaggacgagctgccgccaccatggcctggcgaccgcccggagctgatc
agcccggccgcggaccagcacagccgcctggtcctcggcgagcgcatggtgaagctgtac
gaggtgcgcccggcggacggacgtcatcacgacaccctctggggcatcgccgagcgcttt
ctcggtgatgggctgcggtaccgcgagatcttcgatctgaacgagggccgcacccaaccg
gacggccggacgttgtccaagccgtccctcatccacgccgggtgggtcctgctactgccc
gccgacgcccagggcgacgggttgcgcgtcctgcggatgcccgaaggcaccgccgagtgg
ccgcaggttgcggctgaccccgccggcgacggcgaactggccgagcttttcgatcacgac
agcttcggcgacgccgcagacgccgacgacgacgccgccttcgaggcctggcccggcgcg
gccgacgaccggtacacagcccacgaccgggacacagccgatgaccggcaaacagcaggt
gatcgctacgcaccggacaacccgttcgcgtcatcgcgcctgccctcggggccggacgca
ccggaacaggcggcgggtccgatgctggccgcctccctcgcaccgccacaggacttcctg
ggcgtcgcggccgccggcctgctcgcggccggggtgatggtggcgctgtccgggcgccga
agcggtccggcccagccaccccaggacgccacggaacgggcgctgctgctcgcctcggac
accgaggccgcccgcttcatcgaccggtcactgcgggtactgtccgccgcgctcacggag
caggcgcgtctgcttcccgcggtctacgcggccatcctcaccgaggatgcgctgatcctg
cacatggcgccggcgcaggaggagccgccaccgccaccctgggcggtcggtgaggttccc
ggatcctggtggatcgagcgcactccggaacttctggcggtgtcgggggacggctccttc
gcccagccggtccttggggtgcccgcgccgttcccggcactggtcagcttcggccatgac
gacgccgggtcgcgcattctcgtcgacctcgagggcgcacccggtgtgatcagcctcctc
ggcgaccgcgtcatcgcgatgcaggtggtgatcgccgtcgcgctcgagctggccaccaac
gtctggtcggatgacctgcgggtctgcctgatcggttttcccgccgacgacgacctcgac
gagctgctgacgatcgccccggaacggctgtggaccgcggtcagcgtcgcggaggccctc
gacgaactgtccggtcccgacgacgaggacgcggtcctcgacgtcggagcctacggtgac
gactttcccctcgaagcgggccagcggatcgccggcaatccgggggccctggccccggac
ctgctcgtcctcgcggagccgccggccgaggccgacatcgctcggctggcgagaatggcg
cagggacgccggcatgcggtgggcgtcctcacggtgggcgactccccggccgcccggtgg
cggttcacggtcggaccggaccgccggatgtcgctgggcgtgctgggtgtcgaggtgtgg
gcgcagtccatctccgggcccgaatgccgggcgatcgcggccctgttccgcgcggccgac
gcggcgaccgttccggctcccgccggacctgccgaggacgaaccgccgccgcaggccacg
cctgcgcccgcctcgtccatcgcggccccgccggcgccgccacccctgccaccaccggcg
atgaccgatcctgcccgcgccgtcggggcggcgcaggcagacccgggcgaggcggtgccc
gcgccggcgcaacccactccggacgacgagatcacgcgaccgccggctcgagccgactcg
gttcccggcgtcctgccgtggacgccgccactcgcggcgatcccacccgcgaccggctcg
caggcttccgctccggcgtcggcggacgaggatctcacccggcccccggcgaacggtcgc
cgggcgccgctcgggccgccgcctgttcccctcatctctcccggtggtccggcgtcgccc
gaacgggcggcgtcgccacactccgcagcctccgacgctgagcccgcgcccggaagggta
acgccatccgccccggcgcccacgccgttcctggcagcacccggggacgccggcccgcac
gacaccgacgccatgctgctgtcccatccgagcagtccgctgatccggcccaccgacatt
ccccgggtgcccccggtgctctacttcgagaccccgcggatgcgggccaaccgtgcggcc
caagcccagccccaggctccggcggcccggggagcccaaaccgctggcgccgcgacgccg
tctccaccaccaccaccaccaccaccaccaccggccgcgacagtcccgggtgcgagtccg
ccgcccggaacagcgccgactgccactgcgttgcccgcctccgtgccgcagcccgcggcg
ccagccccggccaccgcgatgcccgggactccgctcgggtccacccggtcctcgataccc
cccgagcgggtaccaaccccgccacgcccaactccctcgccgcctgcggcgcccccaccg
cgcccgccgattccaccgcccaacgagaggccgagcgggcggtatcccaccgccgcgccg
ccccgggagccatcctcggcaccgccggaacactccgggccgccgtccgggcagatcgcg
cgcccgcagccgccggtcagctattccgacggggaaacgaccactccgcgcggccgcacg
tggcaagccggtccggtcccgccgtcgccggggacagccccaccgtcagtggggccgccg
tcggcggggccggcgtcagcagggccggcgaccgcagggccggcgaccgcagggccggcg
accgcagggccggcgaccgcagcgccagaaccgccatcggccaccggactacgacccgtg
cgcgagtcgcgccccgacgagccgatggccacgggggaggcacaggtccgcgtcctgggg
gtgcccaccgtcgaggggcccggacggcaaccgacggacgacctcgatctgctcaccgaa
attgccgtgtacctcgcgctgcaccgtgagggcgcgcaccgccggctgctcgccgaggag
atctggcccgccgacgccgaggccgacgacgatgccgtggacgcggcgctgggagaggcc
cgccgctggctgggagccgacgtcgagggacggccccggctgtccgtcgatccgcagggc
cggtggcgactgagttcggacgtgcgctgcgactgggagctgttcgtcgcctacacccat
cgggcgggcatgcccggaggcgacaccgaggcggacctgacgacggctctgcggatggtc
agcgggccgctgtggacgaacctgcccaccggccggtaccggtgggcgaccaccggcccc
atcgcgcgcagcacccgggccggcgtcgtcgacgtggcccaccgcctcgccgagctcacc
ctgggcttcggagacacgatgacggccatggccgcctgccgcaccggcctgcgggcggtg
cccgcgtccgaggcgctgtggcgcgacctgctgcgcaccgtgtcggcccgaggcgatcgc
cgcactctggaggcggtgaccacggagatgtatcggaccatcggtgccggtggaggccgc
cggggaggccgggccgaggccgagacggacgctctggtccagacgttgctgcccgggttc
aggcgtgcgcggaagtaa
DBGET
integrated database retrieval system
