Frankia alni: FRAAL1699
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Entry
FRAAL1699 CDS
T00384
Symbol
groL
Name
(GenBank) chaperone Hsp60 (GroEL), part of GroE chaperone system
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fal
Frankia alni
Pathway
fal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRAAL1699 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fal03019
]
FRAAL1699 (groL)
03110 Chaperones and folding catalysts [BR:
fal03110
]
FRAAL1699 (groL)
03029 Mitochondrial biogenesis [BR:
fal03029
]
FRAAL1699 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fal04147
]
FRAAL1699 (groL)
Enzymes [BR:
fal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FRAAL1699 (groL)
Messenger RNA biogenesis [BR:
fal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FRAAL1699 (groL)
Chaperones and folding catalysts [BR:
fal03110
]
Heat shock proteins
HSP60 / Chaperonin
FRAAL1699 (groL)
Mitochondrial biogenesis [BR:
fal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FRAAL1699 (groL)
Exosome [BR:
fal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRAAL1699 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FRAAL1699 (groL)
Exosomal proteins of breast cancer cells
FRAAL1699 (groL)
Exosomal proteins of colorectal cancer cells
FRAAL1699 (groL)
Exosomal proteins of bladder cancer cells
FRAAL1699 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CAJ60352
UniProt:
Q0RQ25
LinkDB
All DBs
Position
1835727..1837355
Genome browser
AA seq
542 aa
AA seq
DB search
MAKMIAFDEEARRGLERGMNQLADAVRVTLGPKGRNVVLEKKWGVPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTNDVAGDGTTTATILAQALVREGLRNVAAGANPLGLKKGIE
VAVERVSEELSKQAKEVETKEQIASTASISAGDSAIGGLIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYISPYFVTDADRQEAVLDDPYILIVNSKIAAVKDLLPLLEKVMQ
TSKPLVIISEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAILGDIAILTGGQVIS
EDVGLKLESTSLDLLGRARKIVVTKDETTVVEGSGDPDQIAGRVSQIRNEIDKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKEKKHRIEDAVSNAKAAVEEGIVAGGGVALLQA
SITAFEKLDLSGDEATGARIVALALAAPLRQIASNAGFEGGVVVEKVRDLPVGHGLNAAT
GEYVDLIATGIIDPVKVTRSALQNAASIAGLFLTVEVVVADRPSAGAAEGGDGAGAMAGM
GF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgatcgccttcgacgaggaggctcggcgcggcctggagcgcggcatgaac
cagctggccgatgcggtcagggtcacgctcggtccgaagggtcgcaacgtcgttctggag
aagaagtggggcgtccccacgatcaccaacgacggtgtgagcatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggtgcggagctcgtcaaggaagtcgcgaagaagacc
aacgacgtcgcgggtgacggcaccaccaccgcgacgatcctggcccaggccctggtgcgt
gagggtctgcgcaacgtggccgccggcgcgaaccccctgggcctgaagaagggcatcgag
gtcgccgtcgagcgggtctccgaggagctctcgaagcaggccaaggaggtcgagaccaag
gagcagatcgcctcgaccgcctcgatctccgccggtgactccgcgatcggcggtctgatc
gccgaggcgctggacaaggtcggcaaggaaggcgtcgtcaccgtcgaggaaagcaacacc
ttcggcctcgaactcgagctcaccgagggcatgcgcttcgacaagggctacatctccccc
tacttcgtcaccgacgccgaccgtcaggaagccgtcctcgacgacccctacatcctcatc
gtcaacagcaagatcgccgcggtgaaggacctcctccccctgctggagaaggtcatgcag
accagcaagccgctggtcatcatctccgaggacgtcgagggtgaggcgttggcgaccctg
gtcgtcaacaagatccgcggcacgttcaagagcgtcgcggtcaaggcccccggcttcggg
gaccgccgcaaggcgatcctcggtgacatcgcgatcctcaccggcggtcaggtcatctcc
gaagacgtcggtctgaagctggagagcacctccctggacctcctcggccgcgcccggaag
atcgtggtgacgaaggacgagacgacggtcgtcgagggctccggtgaccccgaccagatc
gccggtcgggtcagccagatccgcaacgagatcgacaagtccgactccgactacgaccgg
gagaagctccaggagcggctggcgaagctcgccggtggtgtcgcggtcatcaaggtcggc
gcggccaccgaggtcgagctgaaggagaagaagcaccgcatcgaggacgcggtgtccaac
gccaaggccgccgtcgaggaaggcatcgtcgccggcggtggcgtcgcgctgctccaggcc
tcgatcaccgccttcgagaagctcgacctctccggcgacgaggccaccggcgcgaggatc
gtggcactggcgctggccgccccgctccgccagatcgcgagcaacgccggcttcgagggt
ggtgtcgtcgtagagaaggttcgggacctgccggtcgggcatggcctgaacgcggccacc
ggcgagtacgtcgacctcatcgccaccggcatcatcgacccggtgaaagtcacccgctcg
gcgctgcagaacgccgcgtcgatcgccggcctgttcctcaccgtcgaggtcgtcgtggcg
gaccgtccgtcggccggtgccgccgagggcggggacggcgcgggtgccatggcgggtatg
ggtttctga
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