Frankia alni: FRAAL1761
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Entry
FRAAL1761 CDS
T00384
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
fal
Frankia alni
Pathway
fal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FRAAL1761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fal03019
]
FRAAL1761
03009 Ribosome biogenesis [BR:
fal03009
]
FRAAL1761
Messenger RNA biogenesis [BR:
fal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRAAL1761
Ribosome biogenesis [BR:
fal03009
]
Eukaryotic type
Pre-60S particles
RNases
FRAAL1761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAJ60413
UniProt:
Q0RPW6
LinkDB
All DBs
Position
complement(1891090..1891860)
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AA seq
256 aa
AA seq
DB search
MRVTLRAVDPSVNGMDRLVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIDLVISA
PDEALEAMVPVVREMHQSSGLTAAVRASTLTLADAQAQVLDYVRARVPEVRKAPLCGNSI
ATDRTFLARYMPALDAHLHYRMIDVSSIKELARRWYVRTYYAAPVKRGGHRALADIQESI
EELRYYRQALFVPPPGPGTEQARTIAAEVRAQTDAILAALPAGASAPTAPTAPAAPSGGA
APKGTPSTTPDRANAT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgacgttgcgagccgtagaccctagtgtcaacgggatggatcgtctggtgtgg
atcgactgcgagatgacgggcctggatgccgcgtcggatctgctgctggaagtggcctgc
ctggttacggacagtgagctgaacatcctcgatgagggcatcgacctggtcatctcggcg
ccggacgaggcgctcgaggcgatggtgcccgtcgtgcgcgagatgcaccagagctcgggc
ctgaccgccgccgtccgcgcctccaccctgaccctggcggacgcgcaggcacaggtcctc
gactacgtccgcgcccgcgtgccggaggtgcgcaaggcgccgctgtgcggcaactcgatc
gccaccgaccgcaccttcctcgcccgctacatgccggcgctggacgcccacctccactac
cgcatgatcgacgtttcgtcgatcaaggaactggcccggcgttggtacgtgcggacgtac
tacgcggcgccggtcaagcgtggtggccaccgggcgctggccgacatccaggagagcatc
gaggagctgcgctactaccggcaggccctgttcgtgccgccacccggccccggcaccgag
caggcgcggacgatcgcggccgaggtccgcgcccagaccgacgccatcctcgccgcgctc
cccgccggcgcctccgccccgaccgccccgaccgcgcctgccgccccgagcgggggcgcc
gcgccgaagggcaccccgtcgaccaccccggaccgcgcgaacgcaacgtga
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