Frankia alni: FRAAL2161
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Entry
FRAAL2161 CDS
T00384
Symbol
idsA
Name
(GenBank) Geranylgeranyl pyrophosphate synthase (Farnesyl diphosphate synthase, Bifunctional short chain isoprenyl diphosphate synthase)
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
fal
Frankia alni
Pathway
fal00900
Terpenoid backbone biosynthesis
fal00997
Biosynthesis of various other secondary metabolites
fal01100
Metabolic pathways
fal01110
Biosynthesis of secondary metabolites
Module
fal_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
FRAAL2161 (idsA)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
FRAAL2161 (idsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fal01006
]
FRAAL2161 (idsA)
Enzymes [BR:
fal01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
FRAAL2161 (idsA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
FRAAL2161 (idsA)
2.5.1.29 geranylgeranyl diphosphate synthase
FRAAL2161 (idsA)
Prenyltransferases [BR:
fal01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
FRAAL2161 (idsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAJ60810
UniProt:
Q0RNS6
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All DBs
Position
complement(2362608..2363684)
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AA seq
358 aa
AA seq
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MTDVRPRVSAVLRRFADARGAALRDIDADLDPFVRVAEDVLLSGGKQVRPAFCYWGWRGA
GGPDCDEIVTAAAALEVLHACALVHDDVMDGSQLRRGAPSAQRRLTLVHRRARLGGDPDT
FGRSAAILLGDLFLTWADDLLMASGLTPGALARAWPTYARMRGELVAGQYLDLASQVGPG
ASQGGAGGGQVDPARVARIARYKTAGYTVVRPLQLGALLAGSRPGLLETYAAFGHPLGEA
FQLRDDVLGVFGDPAVTGKPAGEDLRDGRPNGLLALALRQARPAAAARLRDLVGRPARPG
AVEQARELIAASGAPAAAEERIAARTAQALAVLARSDLDDTTRGALMELATAATARAQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtccgcccgcgggtctccgccgtactgcgccggttcgccgacgcccggggg
gcggcgctgcgcgacatcgacgccgatctcgaccccttcgtccgggttgccgaggacgtg
ctgctcagcgggggcaagcaggtgcggccggcgttctgttactggggctggcggggcgcc
ggcgggccggactgcgacgagatcgtgacggccgccgcagccctggaggtgctacacgcc
tgtgcgctggtgcacgacgacgtgatggacggctcgcagctgcgccgcggtgcgccgagc
gcgcagcgccgcctgaccctggtgcaccggcgggcccggctcggcggcgatccggacacc
ttcggccgctcggcggcgatcctgctcggcgatctcttcctgacctgggcggacgatctg
ctgatggccagcgggctgacgcccggcgccctggcgcgggcctggccgacgtacgcgcgg
atgcgcggcgagctcgtcgccggccagtacctcgacctcgccagccaggtgggacccggg
gccagccaggggggagccgggggcggccaggtggacccggctcgggtcgcgcggatcgcc
cgctacaagaccgccggctacacggtggtccgaccgttgcagctcggcgccctgctcgcc
gggtcacgtcccggcctgctggagacctacgcggcgttcggccatccgctcggagaggcg
ttccagctccgcgacgacgtcctcggggtgttcggcgacccggcggtgaccggcaagccc
gccggggaggacctgcgcgacggccggcccaacgggctgctggcgctggccctgcgccag
gcgcggccggccgcggcggcccggctgcgtgacctcgtcggtcgcccggcccggcccggc
gcggtcgaacaggcgcgcgaactgatcgcggccagcggcgcaccggccgcagccgaggag
cggatcgccgcccgcaccgcgcaggccctggccgtcctggcacgctccgatctggacgac
accacccgcggcgcgctgatggagctcgcgaccgcggccacggcacgggcacagtaa
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