Frankia alni: FRAAL3334
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Entry
FRAAL3334 CDS
T00384
Name
(GenBank) hypothetical protein; putative P-loop containing nucleotide triphosphate hydrolases and TIR domains
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TIR_2
TPR_7
TPR_2
TPR_14
TPR_19
NB-ARC
AAA_16
TPR_16
nSTAND1
AAA_22
TPR_4
TIR
ATPase_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CAJ61978
RhizoBase:
FRAAL3334
UniProt:
Q0RKI0
LinkDB
All DBs
Position
complement(3614846..3618052)
Genome browser
AA seq
1068 aa
AA seq
DB search
MTVGGEGDALDCFVSFAEDGRAWAEWIAGALEGAGLRVLVESWDRVPGSNWTALLDRATR
QARYTIAVVSDGYVNSEYAVAEWGAAWSPRVADGDRRLLVARVTDRPVPGLLGQIAPINL
FDRGVLAGETALLAAVRPDRTDHGDHGDHGEGGTPGGRGDGAGTAGFARRPHPAIHPGEL
PAVWNVPTPPAAFIGRHEALNRLDAALARSPLVTVTGLAGIGKTSVATEYVRAHRREFDA
VWWVPATSPDLLSDRVRALAPALGLPDRAEPAAVLARLDRADGRWLIVLDDAAETALPDW
LRPSETGRLLLTSRNPDWDRLGPVVALPSLNRADSIALLTDRLPAVDPTIATRLAAALAD
HPLALDQAAHRITAGRLPPETYLQALLDQPARVLAQGEVPGRPGVTVATLWDEPLRHLDA
DSPAAAELLRLTAHADATGLPLHLLLADPDDLAQPELRAAAANLLDLADTIAALERSALA
HRDGPTVGMHDLVRTVVRADTAPDHADQLTATLRRLLHAALPADIAGNPAAWPAWRDLLP
HALAALAPPTGTPPTGDPPADDPHADDPHAAWLAEHAAAYLLEQGQPEQALPLAERAATA
REHLAGPDHPDTLAARETLTRATLAAGHVDDASNLATRTLADRTRLLGPDHPATLESQAT
RAWAYQRAGHLDQATTLFERTLAARTRTLGPTHPDTLESRHSLGGAYDDTPGRGDAATRL
LRDTLTDRRRILGTDHPATLSTSHQLAIAYRRLGSPGDATPLFEQTLTTRTRVLGPDHPD
TLHTRHQLGLTHRQAGRLDDATRELDRALSDRDRILGPDHPDTLESAFGLAQVDMYAGRP
ERAVPMFDRVLAGRERVLGPDHPETTRTRELLAETHLRLGRPGEAVPHLESALDRHEGIL
GASHPRTVRVRDTLASAYRGNGQVEMAIPQFERLLGDRSRAHGVADPRTLHTADRLVDAY
RAAHRLPQAIDLNQRVLALREQFLGAQHPDAQASRDSLADTYRQAGRPADAVRLHRGALT
ASMREHGPFHPNTTQARRALADSAEQVRRDLPSPERPASPEPRHDSPW
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgggggcgagggggacgctctcgactgcttcgtgtcattcgccgaggacggt
cgggcgtgggcggagtggatcgccggggcgctggagggtgccggcctgcgcgttctcgtc
gagtcgtgggaccgggtgccgggcagcaactggaccgccctgctggaccgggcgacccgg
caggcccggtacacgatcgccgtcgtctcggacgggtacgtgaactccgagtacgcggtc
gccgagtggggagcggcctggtcaccccgcgtggccgacggggaccgccggttactcgtc
gcccgggtgaccgaccgtccggtgccgggcctgctcggccagatcgctccgatcaacctg
ttcgaccgcggtgtgctcgccggcgagaccgcgctgctcgccgccgtccgccctgaccgc
actgaccacggcgaccacggcgaccacggcgagggcggcacaccgggcggacgcggcgac
ggcgctgggacggcgggtttcgcccgccggcctcatccggcgatccacccgggcgagctg
ccggccgtgtggaacgtgccgacgccgcccgcggcgttcatcgggcgccacgaggcgctc
aaccgcctcgacgcggcgctggcacgctccccgctggtcaccgtcacgggtctcgccggc
atcgggaagaccagcgtcgccaccgagtacgtccgcgcgcatcgccgggagttcgacgcc
gtctggtgggtgcccgccaccagccccgacctgctcagcgaccgagtccgcgccctcgcg
cccgcgctcggactacccgaccgcgccgagccggcggccgtgctcgcccgcctcgaccgc
gccgacggccgctggctgatcgtcctcgacgacgccgccgagacggccctgcccgactgg
ctgcgccccagcgagacgggacgcctgctgctgacgtcccgcaaccccgactgggaccgt
ctcggcccggtcgtggccctgccgtcgctgaaccgcgccgactcgatcgccctgctcacc
gaccgcctacccgccgtcgacccgaccatcgcgacccgcctcgccgccgcactcgccgac
cacccgctcgccctcgaccaggccgcccaccggatcaccgccggccgcctgccccccgag
acctacctgcaggccctgctcgaccagccggcccgcgtgctggcccagggagaggtgccc
ggccgccccggcgtcaccgtcgccaccctctgggacgagccactgcgccacctcgacgcc
gactcccccgccgccgccgaactgctccgcctcaccgcccacgccgacgccaccggcctg
ccgctgcacctgctcctcgccgacccggacgacctcgcccagcccgagctgcgcgccgcc
gccgccaacctgctcgacctcgccgacaccatcgccgccctggaacgctccgccctggcc
caccgcgacggccccacggtggggatgcacgacctggttcgcaccgtcgtccgcgccgac
accgcccccgaccacgccgaccagctcaccgccaccctgcgccggctgctgcacgccgcc
ctgcccgccgacatcgccggcaaccccgccgcctggcccgcctggcgcgacctcctcccc
cacgccctcgccgcccttgcccctcccaccggcacccctcccaccggcgaccctcccgcc
gacgacccgcacgccgacgacccgcacgcggcctggctcgccgagcacgccgccgcctac
ctgctcgaacagggccaacccgagcaggccctcccgctggccgaacgcgccgccaccgcc
cgcgaacacctcgccggccccgaccaccccgacaccctcgccgcccgcgaaaccctcacc
cgcgccaccctcgccgccggccacgtcgacgacgccagcaacctcgccacccgcaccctc
gccgaccgcacccgcctcctcggccccgaccaccccgccaccctcgaatcccaggccacc
cgcgcctgggcctaccaacgcgccggtcacctcgaccaggccaccaccctgttcgaacgc
accctcgccgcccgcacccgcaccctcggccccacccaccccgacaccctcgaaagccgc
cacagcctcggcggcgcctacgacgacactcccggacgcggcgacgcggcgactcgccta
ctccgcgacaccctcaccgaccgccgccgcatcctcggcactgaccatcccgccaccctc
agcaccagccaccagctggccatcgcctaccgccgcctcggctcccccggcgacgccacg
cccctgttcgagcagaccctcaccacccgcacccgcgtcctcggcccggaccaccccgac
accctgcacacccgccaccaactcggcctcacccaccgccaggccggacgcctcgacgac
gccacccgagaactcgaccgagccctgtcggaccgcgaccgcatcctcggccctgaccac
cccgacaccctcgaaagcgcgttcggtctggcccaggtagacatgtatgccggcaggccc
gagcgtgctgtgcccatgttcgatcgcgtgttggcggggcgtgagcgcgtgctcggcccc
gatcatccggagacgacgcggacccgcgaacttctcgccgagacccacctcagactgggg
cgccctggcgaagcagtccctcacctcgaaagcgcgctcgaccgccatgaaggcatcctc
ggggcttcgcacccgcgcacggttcgcgtccgcgacaccctcgcctccgcgtaccgcggc
aacggccaggtcgaaatggccatacctcagtttgaacggctactcggagatcggagccgg
gcgcacggcgtcgccgatccccgcaccctgcacaccgctgacagactcgtcgacgcctat
cgcgccgctcaccggctgccgcaggccatcgacctcaaccaacgagtcctcgcgttacgc
gagcagttcctcggcgcccagcatcctgacgcccaagccagccgagacagcctcgccgac
acctaccgccaagccggccgacccgccgatgcagtacgtctccaccgcggtgcgctcacc
gcctcaatgcgcgagcacggcccgttccacccgaacaccacccaggctcgccgcgccctc
gccgattcggccgagcaagttcgccgcgacctgccctcacctgagcggcctgcctcaccc
gagccgaggcacgactccccctggtga
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