Frankia alni: FRAAL3617
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Entry
FRAAL3617 CDS
T00384
Name
(GenBank) putative WD-repeat protein
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Ge1_WD40
ANAPC4_WD40
NBCH_WD40
DUF4062
NB-ARC
eIF2A
APAF1_C
WDR54
AAA_25
NACHT
APAF-1-like_WHD
Motif
Other DBs
NCBI-ProteinID:
CAJ62260
RhizoBase:
FRAAL3617
UniProt:
Q0RJQ2
LinkDB
All DBs
Position
3910366..3914319
Genome browser
AA seq
1317 aa
AA seq
DB search
MGAGQGAGEPRVQCGQDSVLADVDVGGEALPALEGVIRRISLDSSSCGDHGNLPVVVSVG
SVFVSHTSELAEYPQVRSFVRAAVDAVLRAGARPVQMAQFPAGEQPPAEYCRQQVRQCDV
YLAVVGFRYGSLVPDDLAPNDPVGVSYTELEFRTATAAGLPRLVFLLDENAVVPRSLMDR
NADAVDGFRERLRQSNVVVRAVSTADELGEAVLQSLYELRTQLPADAVRVYPSGRGEVTA
RPRPWMAPPLDRMVERPELGDRLIGALLATGPVGPGRTTVLVGAGGFGKTTLATWAAHHE
EIDRRFPGGLLWVTLGQQARGADLAGRINDLAFILAGRRPEISDPEAAGAELGRLLDDVR
EPVLLVMDDAWDAAQLRPFRFGGRACSRLVTTRVADALSPDWALVAVDVMSGDQARMLVG
NEIEAMAAAVADRLAAVAGRWPVLLNLVNGMLRRQVARGRGPDDAAEDVLDMLATHGPAA
LDPARPETRGRAVAATIEASLSLLTPRDRERYLGLAVFPEDVDIPLDVLALLWPDCRVDA
LCENLAGLGLVADYRLDSPGPRLILHDVIRAYLRQHVQEEPRVHARLVDAAAGLLSEPAE
DGRPAWWTLPGDLGYLWRYLPHHLAEAGRRDAFVALVADLRWTEAKTRQMGTVVGVEADL
ALAATEPTAVLARRLRQSAHLMGPIDPPHALGAILASRLYGLPELGSMLDRYRAALARPR
LEPAWPPPDLPDQSAVSPPTGHAGGIYSCALSPDGSVLATASDDGTVQIRDLAAMTVRAV
LAGHTAAIWRCTFSPDGTSLATAGNDGVVRLWDVESGATRSVLSHRAAVTCCAFSPDGAV
LATTAQNGIVRLWGVADAQARWSVEGHSGGAWSCAFAPDGRWLATAGSDGLVRIWDSADG
TPAGVLSGHGATVRACSISPDGTLVATVSDDQTARLWDLAERSEKAVLTGHSGRLWECVF
SPDGQILATGGHDGTARLWNVCETTEHAALAGHGGAVRGCAFSADSRTLITVGHDQTIRA
WSVAAASLRFSVTGRTSRMNRCAFSPDGTLLAASMVNGAVRVMQVSDRTEIRDFDGQAGG
IRGCAFSPDGTLLATTGNDGTTRLWEIRTGEERLRLRGHTGWVRSCAFSPDGALLATCGL
DRTTRLWQVTDGVLVAVLDGHQNTVHCCDFSPDGTVLATCSGDGMTRLWNVSDGTKRAQL
IGHTDAVTACAFSPDGSLLATTSDDTTVRLWQVDTGEVSHVLMGHTHWVESCAFSPDGTI
LATAGSDGVIRLWNVTNGTYHCALRVTGPLVGVAWHPTGALLAAAGGAGIHLLTYLA
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgggggcgggacagggcgcgggcgagccacgtgtccagtgcgggcaggacagcgtcctc
gcggacgtagacgttggtggggaagccctccccgctctcgagggggtgattcgccggata
tccctggactcatcgagctgcggcgatcacggtaatctgccggttgtggtctctgtgggt
agcgtctttgtgagtcacaccagcgagctggccgagtacccgcaggtccggtcgtttgtg
cgggcggcggttgatgcggtcctgcgggccggcgcgcggccggtgcagatggcgcagttt
ccggcgggggagcagcccccggcagagtactgtcgacagcaggtgcggcagtgtgatgtc
tacctggcggtcgtgggtttccgctatggctcgctcgtacctgacgatctggcgccgaac
gacccggtgggtgtgtcgtacacggagctggagtttcgtaccgccacggcggccgggttg
ccgcggctcgtctttctgctggacgagaatgcggtggtgccacggtcgctcatggaccga
aacgcggacgcggtggatgggttccgtgagcgtcttcgccagtcgaatgtagtggtcagg
gcggtgtccacggccgacgaactgggcgaggcggtgctgcagtcgctgtacgagctgcgt
acgcagctgccggcggatgccgtgcgggtctacccgtcggggcgcggtgaagtgactgct
cggccacgtccgtggatggcgccgccgctggaccggatggtggagcgtcccgagctgggc
gaccggttgatcggtgctttgctcgcgaccggtccggtcggtcccgggcggaccaccgtg
ttggtgggcgcgggcgggttcggtaagacgacgttggcaacctgggcggcccatcacgag
gagatcgaccgccgcttccctggcggccttttgtgggtgacgttgggccaacaggcacgg
ggcgcggacctcgccggacggatcaacgatctggcgttcattctcgcgggccgccggccg
gagatctccgatccggaggcggctggcgcggagctgggccgtctactcgacgacgtgcgg
gaaccagtacttctcgtgatggacgatgcctgggacgcagcccagctgcggccgttccgg
tttggtggtcgcgcctgctcccggctggtgaccacccgcgttgcggatgcgctgtcgccg
gactgggcgctggtcgcggtggatgtcatgtccggggaccaggcccgcatgctggtcggt
aacgagatcgaggccatggccgccgcggtggcggatcggctggcggcggtggccgggcgg
tggccggtgttgttgaacctggtcaacggcatgctgcgcaggcaggtggcgcgtggacga
gggcccgacgatgctgccgaggacgtgctggacatgcttgccacgcacgggccggccgcg
ctcgacccggcacggccggagacccgggggcgtgcggtcgccgcgaccatcgaggcaagc
ctgagcctgctcacgccgcgcgaccgcgagcgctacctcggcctggccgtcttcccggag
gacgtggacattcccctggacgtcctggcactgctctggccggattgcagggtcgacgcg
ctgtgcgagaaccttgctggcctcggcctggtcgccgactaccggctggactcacctggc
ccgcggctgatcctgcacgatgtgatccgcgcctacctgcgccagcatgttcaggaggag
ccccgcgtgcatgcgcggctcgtcgacgcggccgccggtctgttgagcgaaccggccgag
gacggccgtccggcctggtggactcttccaggtgatcttggctatctgtggcggtatcta
ccccaccacctggcggaggccggccgcagggacgccttcgtcgcgctcgtcgccgacctg
cggtggaccgaggccaaaacccggcagatgggcaccgtcgtcggcgtcgaggccgacctc
gctctggcggccactgagccgaccgctgtcctggcccggcgactgcgacagtccgcccac
ctgatgggcccgatcgacccgccgcatgccctcggcgcaatcctggccagcaggctgtat
gggctacccgagctgggcagcatgctggatcgctaccgcgccgcgctggcccgaccgcga
ctcgaacccgcctggccgccacctgacctgcccgaccagtcggccgtttcacctcccacc
ggtcatgcgggcggcatctacagttgcgccctctcgccggacggcagcgtcctggcaacc
gccagtgacgatggcacggtgcagatccgggatctcgctgctatgaccgtccgcgcagtg
ttggcagggcataccgccgcgatctggaggtgcacgttctccccggacggcacgtcgctc
gcgacagccggcaacgacggcgtcgttcgtctgtgggacgtcgagtccggtgcgacgcgg
tcggtgctgtctcatcgagccgcggtgacctgctgtgccttctcgcccgacggcgcggtc
ctcgccaccacagctcagaacggcatcgttcggctgtggggcgtcgccgacgctcaggca
cgctggtccgtcgaggggcactccggcggtgcgtggagctgcgccttcgcaccggacggc
cgatggttggcgacggccggtagcgatgggcttgtccggatctgggacagcgccgacggc
acaccggctggcgtgctgagcggccacggcgccactgtccgagcctgctccatctccccg
gacggaacactggtcgccacggtcagtgacgaccagaccgcccggctttgggacctggcc
gaacgctcggagaaggcggtgctgaccgggcacagcggccggctgtgggagtgcgtcttc
tccccggacggccagatcctggccaccggcggccatgacggaacagccaggctctggaac
gtctgcgagacgaccgaacatgcagccctggccggtcacggcggtgccgtgcgtggttgc
gcgttctcggcggacagccgcacgctgatcaccgttggtcacgaccagacgatccgggcc
tggagcgtcgccgcggcctcgctgcgattctcggtcaccggccgcacctcccggatgaac
cggtgtgcgttttccccggacggtaccctgctggccgccagcatggtcaacggcgccgtc
cgggtgatgcaggtttccgaccggaccgagatccgcgacttcgacggccaggccggcgga
attcgcgggtgcgccttctctccagatggcacgctgctggccaccaccggaaacgacggc
accacccggctgtgggagatacgtacaggcgaggaacgacttcgcctgcgcggccacacc
ggctgggtgcgcagctgcgcattctccccggatggcgccctgctcgccacctgcggcctc
gaccggacgacgcgtctgtggcaggtaaccgacggtgttctggtggccgtgctggacggc
caccagaacaccgttcactgttgcgacttctccccggacggaacggtgctcgccacctgc
agcggggatggaatgacacgcctgtggaacgtgtcggacggcaccaaacgcgcgcagctg
atcggacacacggacgcggtgacggcctgcgcgttctctcccgacggctccctgctcgcc
accaccagcgacgacacgaccgtacgcctgtggcaggtcgacaccggcgaggtcagccac
gtcctcatgggtcacacgcactgggtggaaagctgcgcgttctccccagatggcaccatt
ctcgccaccgccggcagcgacggggtgatccgactctggaacgtcacgaatggcacctac
cactgcgcgctacgcgtcaccggcccactcgtcggcgtcgcctggcaccccaccggcgcc
ctcctcgccgccgccggtggcgccggcatccacctcctcacctacctggcctga
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