Frankia alni: FRAAL3866
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Entry
FRAAL3866 CDS
T00384
Name
(GenBank) putative ABC transporter, membrane binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fal
Frankia alni
Pathway
fal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRAAL3866
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fal02000
]
FRAAL3866
Transporters [BR:
fal02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FRAAL3866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MadM
DUF7409
Motif
Other DBs
NCBI-ProteinID:
CAJ62509
UniProt:
Q0RJ06
LinkDB
All DBs
Position
complement(4149886..4151562)
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AA seq
558 aa
AA seq
DB search
MSTSHRHRTTRRLAATAVSVLAAVSLAACGSGGSSGSGSGTSAAGGAQDGKPVPGGRLKI
AFWSDFQACIDPNQVYWIESRSIDRNIADSLTDQDPKTGKIVPWLATSWTVSPDATSYTF
NLRKDVTFSDGTKFDATAVKTAYDGLHDLGAKSTLGLTYLAGYKSTTVVDPYTVKVDFAT
PNAAFLQASSTTTTAILSPATYKETPEARCAGKVVGSGEFTLDSYSAGKSAKLTRRAGYA
WPSSLIANKGAAYLDGIDVSYIAEDNVRVGSLTNGTIDIAWPRQPITSADQQVIKASGAS
IQTRALPGIIGLLIPNVTGGRPLADLQVRKALYKALDVTSYAKTVYWDDYPVAKSPVTST
TPYATDESAKLVHDPAGAAKLLDQAGWALGPDGYRHKDGKKLTLTYLTNAAGPGDQLVQD
QLKKVGIDYQIKVVTAAQLTPTGNSGDWDLAGGYLTRADPSVLGSSLDQAVSKQYTAKYS
QDPATAAKISALFAKGLSTADPTQRAAAYKDLQDALIDNGVAYPLFDRLQTAGVSGKVHG
FAWTSESFLRANDIWLSK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgtcgcaccgtcatcgaacgacgagacggctggccgctacggccgtctcggtc
ctcgcggccgtctccctcgcggcctgcgggagcggcggctcctccggttccggttccggc
acctccgcggccggcggcgcccaggacggcaagcccgttcccggcgggcgtctgaagatc
gccttctggtcggacttccaggcctgcatcgacccgaaccaggtgtactggatcgagtcc
cgcagcatcgaccggaacatcgccgactcgctgaccgaccaggacccgaagaccggcaag
atcgtcccctggctcgcgacgagctggacggtgagccccgacgccacctcgtacacgttc
aacctgcgcaaggacgtgacgttcagcgacggcaccaagttcgacgcgaccgcggtcaag
acggcctacgacgggctgcacgacctcggcgccaagtcgacgctcggcctgacctacctc
gccggctacaagtcgaccaccgtcgtcgacccgtacaccgtcaaggtcgacttcgccacg
cccaacgccgcgttcctgcaggcctcctcgacgacgacgacggccatcctgtcgccggcg
acctacaaggagaccccggaggcgcgctgcgccggcaaggtcgtcggctcgggtgagttc
accctcgacagctactcggccggcaagtcggcgaagctcaccaggcgtgccggctacgcc
tggcccagctcgctgatcgcgaacaagggcgcggcgtacctcgacggcatcgacgtcagc
tacatcgccgaggacaacgtccgggtcggcagcctgaccaacggcacgatcgacatcgcc
tggccgcgccagccgatcacctccgccgaccagcaggtcatcaaggcctccggcgccagc
atccagacccgcgccctgcccggcatcatcgggctgctgatcccgaacgtcaccggcggc
cggccgctggccgacctgcaggtccgcaaggcgctgtacaaggcgctggacgtgaccagc
tacgccaagaccgtgtactgggacgactacccggtggcgaagagcccggtgacctcgacc
accccgtacgcgacggacgagtccgccaagctcgtccacgaccccgccggggcggcgaag
ttgctcgaccaggccggctgggccctcgggcccgacggctaccggcacaaggacggcaag
aagctgacgctgacctacctgaccaacgcggcgggccccggtgaccagctcgtccaggac
cagctcaagaaggtcggcatcgactaccagatcaaggtcgtcacggccgcgcagctcacc
ccgaccggcaactccggcgactgggaccttgccggcggctacctgacccgggcggacccg
agtgtgctcggctcctcgctcgaccaggccgtgtccaagcagtacacggcgaagtactcc
caggacccggcgaccgcggcgaagatcagcgcactgttcgccaaggggctgtccacggcc
gaccccacccagcgcgccgccgcctacaaggacctgcaggacgccctgatcgacaacggg
gtggcctacccgctcttcgaccggctgcagaccgccggcgtctccggcaaggtgcacggc
ttcgcgtggacctcggagagcttcctgcgcgccaacgacatctggctgtccaagtaa
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