Frankia alni: FRAAL4086
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Entry
FRAAL4086 CDS
T00384
Name
(GenBank) putative oligopeptide transport protein (ABC superfamily, atp_bind)
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
fal
Frankia alni
Pathway
fal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRAAL4086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fal02000
]
FRAAL4086
Transporters [BR:
fal02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FRAAL4086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
nSTAND3
AAA_29
AAA_16
NACHT
PRK
DUF87
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
CAJ62728
UniProt:
Q0RIE1
LinkDB
All DBs
Position
complement(4420249..4421994)
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AA seq
581 aa
AA seq
DB search
MRDLRVSFAREHQSSRERRSSPEQQVAEAVRGVSFEIRRGQIVAIVGESGSGKSVTARSL
VGLAGDNAAVRARALSFDGLDLRTLGSRQWRSVRGGRIGFVLQDAMGSLDPLRSIAAEVG
EPLREHRTVERGRVEEEVVRLLAEVGIPNPRTRLRQHPHQLSGGLRQRALIASALAARPD
LVIADEPTTALDVTVQKQVLALLRERTADGTAMLLISHDLAVVAELADHVYVMRDGVFVE
QGPTRTVLDAPAHAYTRQLLAAASALGTHGGGAPAPSTPVAAAPVRVSPPPGPAPRVPAD
PAAVVLAARGLVKTYELPGRQRLTAVDDVSFVVRAGETVGLVGESGSGKTTVGRMLMGLV
APDSGEVTVDGVGWTALDRAARRAARRRVQMIYQDPLGSFDPRYTARQILEEPLRVSSTS
AADRAKRVGQLLEHVGLGPEVLPTRARALSGGQRQRLAIARALASDPEVIVCDEPVSALD
VSIQAQVLEVFRDVQARLGVAYVFISHHLGVVHYLSHRVVVMHRGQVVEQGPAEQVFGAP
RHPYTQALLAAVPRLAVAQKDTAEAATAESADDVVVGPPRR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgatctgcgcgtctccttcgctcgggagcatcagtcgtcccgggagcgccggtcg
tccccggagcagcaggtcgcggaggcggtgcggggagtctccttcgagatccgacgaggc
cagatcgtggcgatcgtcggcgagtccggatccggtaagagcgtgaccgcccgcagcctg
gtgggcctggccggcgacaacgcggcggtgcgcgcgcgggcgttgtcgttcgacggcctc
gatctgcgcacgctgggatcccggcagtggcgctcggtgcgcggcggcaggatcggcttc
gtcctgcaggacgcgatgggctcgctggaccccctgcgttccatcgccgccgaggtcggc
gagccgttgcgagagcaccgcaccgtcgaacgcggccgcgtcgaggaggaggtcgtccgc
ctgctggcggaggtgggcatcccgaacccgcggacccggctgcgccagcatccccaccag
ttgtccggtgggctgcgccagcgtgcgctgatcgcgtccgccctcgccgcacggcccgat
ctggtcatcgcggacgagcccaccacggcgctggacgtgacggtgcagaagcaggtgctc
gcactgctgcgggagcgcacggcggacggcacggcgatgctgctgatcagccacgatctc
gcggtcgtggccgaactggccgaccacgtctacgtgatgcgggatggggtcttcgtcgaa
caggggcccacccggaccgtgctcgacgcgcccgcccacgcctacacccgccagctgctc
gcggcggcctcggccctgggtacacacggcggcggggcgccggcaccctcgacgcccgtc
gccgccgcaccggtgcgggtgagccccccgcccgggccggcgccgagggtgcccgccgat
ccggctgcggtggtgctggcggcccgcgggctcgtcaagacctacgaactccccggccgg
cagcggctgacagcggtcgacgacgtctccttcgtcgtgcgggcgggggagaccgtcggg
ctcgtcggggagtccgggtcgggcaagaccacggtcggccggatgctgatggggctcgtc
gcaccggactccggcgaggtcacggtggacggtgtcgggtggaccgcgctggaccgcgcc
gcccggcgcgcggcccgccggcgagtccagatgatctaccaggacccgctgggctcgttc
gacccccgttacacggcccgccagatcctcgaggagccgctgcgcgtgtcgtcgacgtcg
gccgccgaccgggcgaagcgggtggggcagctgctggagcatgtcgggctcggaccggag
gtcctgcccacccgggccagggcactgtccgggggccagcgccagcggctggcgatcgct
cgcgcgctcgcgtccgacccggaggtgatcgtctgcgacgagccggtgtcggccctggac
gtctcgatccaggcacaggtgctcgaggtgttccgggatgtgcaggcccgcctgggcgtc
gcgtacgtcttcatctcccaccacctgggcgtcgtgcactacctcagccatcgggtggtg
gtcatgcaccgggggcaggtcgtcgaacagggaccggcggagcaggtgttcggcgctccc
cggcatccctacacccaggcgctgctcgccgcggtcccccgcctggccgtcgcgcagaag
gacaccgccgaggcggccaccgccgagtcggccgacgatgtcgttgtcggcccgccgcga
cgctga
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