Frankia alni: FRAAL4288
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Entry
FRAAL4288 CDS
T00384
Name
(GenBank) putative AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
fal
Frankia alni
Pathway
fal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRAAL4288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fal03000
]
FRAAL4288
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL4288
Enzymes [BR:
fal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FRAAL4288
Transcription factors [BR:
fal03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FRAAL4288
DNA repair and recombination proteins [BR:
fal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRAAL4288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
Motif
Other DBs
NCBI-ProteinID:
CAJ62930
UniProt:
Q0RHU3
LinkDB
All DBs
Position
complement(4646990..4648720)
Genome browser
AA seq
576 aa
AA seq
DB search
MRTDEGRYEAVASRDARFDGAFYFAVTTTGIYCRPSCPAVTPKRTNVRFFPTAAAAHGAG
FRACRRCRPDAVPGSAEWDVRADVVGRAMRLIGDGVVDREGVAGLAARLGYSARQLHRHL
TAEVGAGPLALARARRAHTARLLLQTTALPATEVAFAAGFASVRQFNDTVRTVYAATPLE
LRGPRPPRVVPSGRHRGDRAGPGGRPDEGGLTLRLGYRRPYEAGHLFDYLAARALPGMEE
VVGERGRRTYRRTLRLAHGHGVAEVAERPAGDDAGWLDCRLVLSDLRDLGSAVSRVRRLF
DLDADPLAVADRLAGDPALAAQVGRLPGLRAPGAADPHELAVRAVLGQQVSVAAGRRLGA
VLLAAYGEPLATPSGGLTVLFPRVDTIACAGLVELGMPAGRRDTVRTLAGALADGSVVLD
AGVDRDEAHRALLALRGIGPWTAGYLRMRALGDPDVLPPGDAALRAADRRGDVDLGRAAA
WAPWRSYAAHHVWAAAATRGDPSRLTRVGLRAGRARPGRHAAEDGCGPGAWSELTTHVEP
GPHVERGPHVEPGPRGEAGPVGEAVPMGGTGSRGER
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaggacggacgagggccgctacgaggcggtggccagccgggatgcccgattcgatggc
gccttctacttcgccgtgaccacgacgggcatctactgccggccaagctgcccggcggtg
acgccgaagcggacgaacgtccggttcttcccgacggccgcggcggcgcacggcgcgggc
ttccgggcctgccggcggtgccggccggacgcggtgccaggctcggccgagtgggacgtc
cgcgcggacgtggtcggccgggcgatgcgcctgatcggcgacggtgtcgtcgatcgggag
ggcgtggccggcctcgccgcccggctgggctacagcgcgcgccagctccaccggcacctg
accgccgaggtgggcgccgggccgctcgccctggcccgagcgcggcgtgcacacaccgcg
cggctgctgctgcagaccaccgcgctgcccgccaccgaggtggccttcgccgccggcttc
gcgagcgtccgccagttcaacgacaccgtccggacggtctatgcggcgacgcccctcgag
ctgcgcggcccacggccgccgcgggtcgtgccgtccggccggcaccgcggcgatcgggcg
ggtccgggcggccgccccgacgagggtggtctcaccctcaggttgggctaccgccggccc
tacgaggcgggtcacctgttcgactacctcgccgcccgggccctgcccgggatggaggag
gtcgtgggcgagcgaggccggcgcacctaccggcgcaccctgcgcctggcccacggccac
ggcgtcgcggaggtggccgagcgcccggccggcgacgacgccggctggctggactgccgg
ctggtcctgagcgatctgcgggacctcggcagcgccgtcagccgggtccggcgactgttc
gacctcgacgccgacccgctcgccgtcgccgaccggctcgccggtgatcccgccctggcc
gcgcaggtgggccgcctgcccggactacgcgcccccggtgccgccgacccacatgagctc
gccgtgcgggccgtgctcggccagcaggtgtcggtggccgccgggcggcgcctcggcgcg
gtgttgctcgcggcctacggcgagccgctggccacgccgagcggcggcctgaccgtgctg
ttcccccgggtcgacaccatcgcgtgcgctggtctggtggagctgggcatgccggcgggg
cgccgggacaccgtgcggacactcgccggtgcactcgcggacggctccgtggtcctcgac
gccggcgtggaccgcgacgaggcgcaccgggcgctgttggcgctgcgcggcatcgggccc
tggacggcgggttacctccggatgcgtgccctcggcgacccggacgtgctcccgccgggc
gacgcggccctgcgtgccgcggaccgccgcggcgacgtcgacctgggtcgcgccgccgcc
tgggcgccctggcgcagctatgcggcgcaccacgtgtgggccgcagcagccacccgcgga
gatccatccagactgacgcgcgtgggtctgcgcgccggccgtgcccgcccgggccggcac
gcggcggaagacggctgcgggcccggtgcctggtccgagttgaccacgcacgtcgaacca
ggcccgcacgtcgaacgaggcccgcacgtcgaaccaggcccgaggggcgaagcaggcccg
gtgggcgaagcagtcccgatgggcgggactggatcgagaggggagcggtga
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