Frankia alni: FRAAL4595
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Entry
FRAAL4595 CDS
T00384
Symbol
uvrA
Name
(GenBank) DNA excision repair enzyme UvrABC; UvrA subunit
KO
K03701
excinuclease ABC subunit A
Organism
fal
Frankia alni
Pathway
fal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FRAAL4595 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL4595 (uvrA)
DNA repair and recombination proteins [BR:
fal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRAAL4595 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FRAAL4595 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
AAA_16
AAA_21
nSTAND1
RsgA_GTPase
AAA_25
AAA_22
AAA_23
NACHT
DnaJ_CXXCXGXG
FANCL_C
Viral_helicase1
NTPase_1
MMR_HSR1
cobW
FtsK_SpoIIIE
DUF3090
ScfRs
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAJ63237
UniProt:
Q0RGZ8
LinkDB
All DBs
Position
complement(4985033..4987945)
Genome browser
AA seq
970 aa
AA seq
DB search
MRGAREHNLRDVDLDLPRDGLIVFTGMSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFL
GQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARAGRPHCPKCGR
PISRQTPQQIVDRLLELPEGTRFQVLAPVVRGRKGEYLDLFAELQSSGFARARVDGTVVA
LTDVPKLEKQRKHTIEVVVDRLAAKESAKRRLTDSVETALRLGGGLVLVDFVDRPADDPE
RERMYSEHLACLYDDLSFEELEPRSFSFNSPYGACPDCSGIGTRKEVDPELVVPDPTLSL
AQGAVAPWSGGHNKEYFERLLSALAEDLSFRMDTPWEGLPERARKAVLHGSGETEIHVGY
TNRYGRKRSYYTSFEGVIGFIGRRHREAESDSSRERYEGYMRDVPCPSCRGARLKPESLA
VTVGGRSIAEVSGMAIGECAGFLRGLELSEREQAIAGRVLKEVDARLTFLLDVGLDYLSL
DRAAGTLAGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIQTLVRLRDLGNT
LIVVEHDEDTIRASDWVVDIGPGAGEHGGRVVVSGPVAELLASEESMTGAYLSGRRQIPV
PDIRRVPTKGRALTVHAAREHNLRDVTVSFPLGCFVAVTGVSGSGKSTLVNDILASVLAN
KLNGAREVPGRHRTVTGLDHLDKAVRVDQSPIGRTPRSNPATYTGVFDHIRRLFAETTEA
KVRGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYK
GRNIAEILDMPIEEAAEFFAAVPAIARHLRTLNDVGLGYVRLGQSAPTLSGGEAQRVKLA
SELQRRSTGRTVYVLDEPTTGLHFEDIRKLLGVLGRLVDAGNTVIVIEHNLDVIKTADWI
IDMGPEGGTGGGRVVAQGSPEAVAAVEESHTAVFLREILGDRVSAAGGAAAETGGGAGAR
RRRLAEAAAR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtggcgcgcgtgagcacaacctccgcgacgtcgatctcgacctgccccgtgacggg
ctgatcgtcttcaccggcatgtcggggtccggcaagtccagcctcgccttcgacaccatc
ttcgccgaggggcagcggcgctacgtggagtcgttgtccgcctacgcccgccagttcctc
gggcagatggacaagcccgacgtggacttcatcgaggggctgtccccggcggtctccatc
gaccagaagtccacctcgcgcaacccgcggtccaccgtcggcacgatcaccgaggtgtac
gactacctgcggctgctgttcgcccgcgccggccggccgcactgtccgaagtgcgggcgg
ccgatctcccggcagaccccgcagcagatcgtcgaccggctgctggagctgcccgagggc
acccgcttccaggtgctcgcccccgtggtccgcgggcgcaagggcgagtacctcgacctg
ttcgccgagctacagagctccgggttcgcccgggcccgcgtcgacggcaccgtcgtcgcg
ctcaccgacgtgccgaagctggagaagcagcgcaagcacacgatcgaggtcgtggtcgac
cggctggcggccaaggagtcggccaagcggcgcctgaccgactcggtggagacggcgctg
cgcctcggcggcggcctcgtcctcgtcgacttcgtcgaccggcccgccgacgaccccgag
cgcgagcggatgtactccgagcacctcgcctgcctctacgacgacctgtccttcgaggag
ctcgaaccgcggtcgttctcgttcaactcgccctacggggcctgcccggactgcagcggc
atcggcacccgcaaggaggtcgacccggagctcgtcgtgcccgatccgacactctccctg
gcccagggcgcggtggcgccgtggtccggcggccacaacaaggagtacttcgagcggctg
ctcagcgccctcgccgaggacctcagcttccggatggacaccccctgggaggggctgccg
gagcgggcccgcaaggcggtgctgcacggcagtggcgagaccgagatccacgtcggctac
accaaccgctacggccgcaagcgctcctactacacctcgttcgagggggtcatcggcttc
atcggccgccgccaccgggaggccgagtcggacagcagccgggagcgctacgagggctac
atgcgcgatgtgccctgcccgtcctgccgcggcgcccggctcaagcccgagtcgctggcg
gtgacggtcggcggccggtccatcgccgaggtctcgggcatggcgatcggcgagtgcgcc
gggttcctgcgcgggctggagctcagcgagcgggagcaggcgatcgccggccgggtgctc
aaggaggtcgacgcccggctgacgttcctgctcgacgtcgggctcgactacctctccctg
gaccgcgccgccggcaccctggccggcggggaggcgcagcgcatccggctggccacccag
atcggctccggtctcgtcggggtgctctacgtgctcgacgagccgtcgatcgggctgcac
cagcgggacaaccgccggcttatccagaccctggtgcggctgcgcgacctgggtaacacg
ctcatcgtcgtcgagcacgacgaggacacgatccgggcctcggactgggtggtcgacatc
ggccccggcgcgggcgagcacggcgggcgggtcgtcgtctccgggccggtggcggagctg
ctcgccagcgaggagtcgatgaccggcgcctacctctccggccggcggcagatcccggtg
cccgacatccgccgggtgccgacgaagggccgcgcgctgaccgtgcacgccgcccgcgag
cacaacctgcgcgacgtcacggtctccttcccgctgggctgcttcgtggccgtcaccggg
gtgtccgggtcgggcaagtccaccctcgtcaacgacatcctcgccagcgtgctggcgaac
aagctcaacggcgcccgcgaggtgcccggccggcatcggaccgtcaccggcctcgaccat
ctcgacaaggcggtccgggtcgaccagtcaccgatcggccggaccccccggtccaacccg
gcgacctacaccggcgtcttcgaccacatccgccgcctgttcgccgagacgaccgaggcc
aaggtccgcggctacctgccgggccggttctcgttcaacgtcaagggcgggcgctgcgag
gcgtgctccggcgacggcacgatcaagatcgagatgaacttcctgccggacgtgtacgtg
ccgtgcgaggtctgccatggcgcccggtacaaccgggagaccctcgaggtccactacaag
ggccgcaacatcgccgagatcctcgacatgccgatcgaggaggcggccgagttcttcgcc
gcggtgccggcgatcgcccgtcacctgcgcacgctcaacgacgtcggcctcggttacgtc
cgcctcggccagtcggcgccgacgctgtccggcggcgaggcccagcgggtcaagctcgcc
tccgagctgcagcggcgctccaccggccggaccgtctacgtcctcgacgagccgacgacc
gggctgcacttcgaggacatccgcaagctgctcggggtgctcggccggctcgtcgacgcc
ggcaacacggtgatcgtcatcgagcacaacctcgacgtcatcaagacggcggactggatc
atcgacatggggccggagggcggcaccggcggcggtcgggtcgtcgcccagggctcgccc
gaggccgtcgccgccgtcgaggagagccataccgcggtcttcctccgggagatcctcggc
gaccgggtctcggccgccggcggggctgcggccgagaccggcggtggggcaggcgctcgg
cggcgcaggctcgccgaggcggcagcccgctga
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