Frankia alni: FRAAL4613
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Entry
FRAAL4613 CDS
T00384
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fal
Frankia alni
Pathway
fal03030
DNA replication
fal03410
Base excision repair
fal03420
Nucleotide excision repair
fal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRAAL4613 (polA)
03410 Base excision repair
FRAAL4613 (polA)
03420 Nucleotide excision repair
FRAAL4613 (polA)
03440 Homologous recombination
FRAAL4613 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fal03032
]
FRAAL4613 (polA)
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL4613 (polA)
Enzymes [BR:
fal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRAAL4613 (polA)
DNA replication proteins [BR:
fal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FRAAL4613 (polA)
DNA repair and recombination proteins [BR:
fal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FRAAL4613 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRAAL4613 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
CAJ63255
UniProt:
Q0RGY0
LinkDB
All DBs
Position
complement(5008976..5011630)
Genome browser
AA seq
884 aa
AA seq
DB search
MLLDGHSLAYRAFYALPVENFSTTTGQPTNAVYGFTSMLINVLRDEKPTHVAVAWDLPTP
TFRHTQYAEYKAGRSETPADFVGQVSLIHQVCDALAVPGVSAAGYEADDVIATLATAGAA
VGMDVLVVTGDRDALQLVDERVTVLMTRKGISDMTRFTPDEVQAKYGLSPVQYPDFAALR
GDPSDNLPSVPGVGEKTATKWIQQFGSLAELVDRADEIGGKTGASLRAHLASVIRNRSLT
ELSRDVPLPVGPDELRLRPWDREAVHQLFDTLQFRVLRERLYAALATAPPPVEEGFEVEL
TTLGPDEVAQWLDEHARGVGRTGLHPRGTWGRGTGVLSGLALASADGAAAWLDPTQLTPA
DLAALGGWLADAHQPKAAHDVKGPMLALAELGLTLAGVTSDTALAAYLALPGQRSFDLAD
LVARYLHRDLAVEPAGNGQLTLDGSGEAEESHADAVRARACLELADELDADLERRSAAVL
LRDMELPLVTVLAGMERAGIAADQDHLTELQKHYGGEVTAVAAQAHEIVGRTFNLGSPKQ
LQQILFDDLGLPKTKKIKTGYTTDADALAWLAVQSDHPLLPVLLRHRDVARLKTVVDSLL
PMIDDAGRIHTTFNQMIAATGRLSSTDPNLQNIPIRTAEGRQIRRAFVVGPGYETLLTAD
YSQIEMRIMAHLSGDEGLIEAFGSGEDLHTFVAAEAFGLPVSEVDPELRRRIKAMSYGLA
YGLSAFGLASQLGIAPDEAREHMDAYFGRFGGVRDFLRGVVERARRDGYTETMLGRRRYL
PDLTSDNAQRRQMAERMALNAPIQGSAADIIKIAMLGVDRALRAGGHASRLLLQVHDELV
LEIAPGEYDAVEALVRAEMTSAYTMSVPLDVSVGAGRTWDDAAH
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcttgacgggcattcgctggcctaccgcgctttctacgcgttgccggtggagaac
ttctccaccaccaccggtcagccgaccaatgccgtgtacggattcacctcgatgctcatc
aacgtcctgcgcgacgagaagccgacccacgtggcggtcgcctgggacctgccgacgccg
accttccgccacacccagtacgccgagtacaaggcgggccgctcggagaccccggccgac
ttcgtcgggcaggtcagcctcattcatcaggtgtgcgacgcgctcgccgtgccgggggtc
agcgccgccggctacgaggccgacgacgtgatcgccacgctcgcgaccgcgggcgccgcg
gtggggatggacgtgctggtcgtgaccggcgaccgggacgcgttgcagctcgtcgacgag
cgggtcacggtcctgatgacccgcaagggcatctccgacatgacccgcttcaccccggac
gaggtgcaggcgaagtacggtctctcgccggtgcagtacccggattttgcggcgctgcgc
ggcgacccgtccgacaacctgccctccgtgccgggggtgggggagaagaccgcgaccaag
tggatccagcagttcgggtccctcgccgagctggtggaccgggccgacgagatcggcggg
aagaccggggcgtcgctgcgcgcccatctggcgtcggtcatccgcaaccgttcgctgacc
gagctgtcgcgcgatgtcccgctccccgtcggcccggacgagctgcgcctgcgtccctgg
gaccgcgaggccgtccaccagttgttcgacacgctgcagttccgcgtcctgcgtgagcgc
ctctacgccgccctggccaccgccccgccgcccgtggaggagggcttcgaggtcgagctg
accaccctcggccccgacgaggtggcccagtggctcgacgagcacgcccgcggcgtcggc
cgtaccggcctgcatccccgcggaacctgggggcggggcacgggcgtgctgtccggcctc
gcgctggcctcggccgacggcgccgcggcctggctggacccgacccagctcaccccggcg
gacctggcggcgctcggcggctggctcgccgacgcccaccagccgaaggcggcgcacgac
gtcaagggtccgatgctggctctcgcggagctgggcctgacactggccggcgtcaccagt
gacaccgcgctggccgcctacctggccctgcccggccagcgctcgttcgacctggccgat
ctggtcgcccgctacctgcaccgggatctggccgtcgagccggccggcaacggccagctc
accctcgacggctccggggaggcggaggagtcccacgccgacgcggtgcgggcccgcgcg
tgcctggagctcgccgacgagctcgacgcggacctggagcgccgctccgccgcggtcctg
ctgcgggacatggagcttccgctggtcacggtcctcgccgggatggagcgggccggcatc
gccgccgaccaggatcatctgaccgagctgcagaagcactacggcggcgaggtcacggcc
gtcgccgcgcaggcccacgagatcgtcggccggacgttcaacctcggttcccccaagcag
cttcagcagatcctgttcgacgacctcggtctgcccaagaccaagaagatcaagaccggc
tacaccaccgacgccgacgccctcgcgtggctcgcggtgcagtccgaccatccgctgctg
ccggtgctgctgcgccaccgggacgtggccaggctcaagaccgtcgtcgactcgctactg
cccatgatcgacgatgccggccgcatccacaccacgttcaaccagatgatcgccgccacg
ggccggctgtcgtccacggacccgaacctgcagaacatcccgatccgcaccgccgagggg
cgccagatccggcgcgccttcgtcgtcggccccggctacgagaccctgctcaccgccgac
tactcgcagatcgagatgcggatcatggcgcacctgtccggcgacgagggcctcatcgag
gcgttcgggtccggcgaagacctgcacaccttcgtcgccgcggaggcgttcggcctgccc
gtcagcgaggtcgaccccgaactgcggcggcgcatcaaggcgatgtcctacgggctggcg
tacgggctgtcggcgttcggactcgccagccagctcgggatcgcccccgacgaggcgcgc
gagcacatggacgcctacttcggccgattcggcggggtgcgcgacttcctgcgcggcgtg
gtcgaacgagcccgccgggacggctacaccgagacgatgctcggccgccggcgctacctg
cccgacctgaccagcgacaacgcccagcgccggcagatggccgagcggatggccctcaac
gccccgattcagggctcggccgccgacatcatcaagattgccatgttgggggtggaccgg
gcgctgcgggccggcgggcatgcctcccggctgctgctccaggtccacgacgaactcgtg
ctggagatcgctcccggcgagtacgacgcggtcgaggcgctcgtccgcgccgagatgacg
tcggcatacaccatgtcggtgcccctcgacgtcagcgtcggagccggccggacctgggac
gacgccgcccactga
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integrated database retrieval system
