Frankia alni: FRAAL4657
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Entry
FRAAL4657 CDS
T00384
Symbol
dapE-like
Name
(GenBank) succinyl-diaminopimelate desuccinylase like
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fal
Frankia alni
Pathway
fal00300
Lysine biosynthesis
fal01100
Metabolic pathways
fal01120
Microbial metabolism in diverse environments
fal01230
Biosynthesis of amino acids
Module
fal_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRAAL4657 (dapE-like)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fal01002
]
FRAAL4657 (dapE-like)
Enzymes [BR:
fal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FRAAL4657 (dapE-like)
Peptidases and inhibitors [BR:
fal01002
]
Metallo peptidases
Family M20
FRAAL4657 (dapE-like)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
Motif
Other DBs
NCBI-ProteinID:
CAJ63299
RhizoBase:
FRAAL4657
UniProt:
Q0RGT7
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All DBs
Position
complement(5049068..5050252)
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AA seq
394 aa
AA seq
DB search
MYSQSGRYPTAGVEVLERTDLLRLAAALVEVPSVSGDEHLLAGLVEHRLRARAPGLRMIR
DGNNIIATTRGAQAGKPARDRHVVLAGHLDTVPAAKNYPTAIPGTVSGLGAVDMKGGLAV
MLVLAERAQDSDHHLTFVFYDNEEVGSRRSGMTLLFDRYQDFLQADLAILLEPTGGLLEA
GCQGNLVVELRYDGSRAHTARPWRGVNAIHRATPALARFGSFEPGPAVVDGLTYRQSLSV
VGVSSGVQGNVVPDACQVRVNFRHAPNLSSEEALGTVVGLAGDADGTQVVLSSPPAPPNL
EHPLLAALRASAGVDVRPKLGWTDVGRFAAHGVPAVNFGPGDSELAHTGRETVSGAELAA
CHAALARFLFADAAGIPPDRLRNIGPHPASEVRP
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgcagtcagggcggtacccgaccgccggcgtcgaggtgctcgagcgcacggac
ctgctgcggttggccgcggcgctggtggaggtgccgtcggtcagcggcgacgagcacctg
ctggccgggctggtggagcaccgcctgcgggcccgcgcacccggtctgcggatgatccgg
gacggcaacaacatcatcgcgacgacgcggggtgcacaggcggggaaacccgcgcgggat
cggcacgtggtgctggccggccatctcgacacggtgccagcagcgaaaaattaccccacg
gcaataccgggaacggtatccgggcttggcgcggtggacatgaagggcggtctcgccgtg
atgctggtcctggccgaacgggcgcaggactccgaccatcacctcacgttcgttttctac
gacaacgaggaggttggctcccgtcgcagcgggatgaccctgctgttcgaccggtaccag
gatttcctccaggccgacctggcgattctgctcgagccgaccggcggcctcctcgaggcg
ggctgccagggcaatctggttgtcgagctgcgctatgacggctcacgcgcccacaccgcg
cgaccatggcggggcgtcaacgccattcatcgtgcgactcccgccctggcccggttcggg
agttttgaaccgggccccgcggtcgtcgacggactcacctaccggcagtccctttccgtc
gtgggggtgagcagcggcgtgcagggcaatgtcgtgccggatgcctgtcaggtacgggtg
aacttccggcacgcgccgaacctgagcagcgaggaggcgctgggcacagtggtcggcctc
gccggggacgccgacggcacccaggtggtcctgtcctcgccgcccgcgccacccaatctg
gagcatcccctgctcgcggcgctgcgagcgagcgccggggtggacgtgcgaccgaaactc
ggctggactgacgtcggacggttcgcggcccacggcgttcccgccgtcaacttcggtccg
ggggattccgagctcgcccacaccggccgcgagaccgtcagcggtgctgagctggcggcc
tgccacgcggcgctcgcccgcttcctgttcgcggacgccgcggggattccgcccgacagg
ctccggaacatcggtccgcacccagcgtcggaggttcgaccttga
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