Frankia alni: FRAAL5693
Help
Entry
FRAAL5693 CDS
T00384
Name
(GenBank) hypothetical protein; putative PAS and GAF domains
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIE
GAF_2
PAS_4
GAF
HATPase_c_2
PAS_3
PAS
HATPase_c
GAF_3
PAS_9
Motif
Other DBs
NCBI-ProteinID:
CAJ64325
RhizoBase:
FRAAL5693
UniProt:
Q0RDZ1
LinkDB
All DBs
Position
complement(6155883..6159203)
Genome browser
AA seq
1106 aa
AA seq
DB search
MDALFVRAPVGLALLDRAGRFVRVNDALTRLDRRSARDHLGRTVSEVLGDSDAELDALLA
RVLRTGEPVVDLEVGVAGPAGTPLTWLASWFPVSDPQLGPVGVSFVALDVTGLQIADRER
LRAQARYRGLADAAGLDVFHATADGALDVDLPGWRSATGQQPGALAGGGWLAGVHPDDRD
RVARLWRGAVERGETFEAEFRISAPSGVGVAERVVTARVLPVSGPPEDAAGGQAAAGNGP
ARDGRPTEWLGVVRDLTGERAAEAARADADQRAEAAVEQAEAAAQRAESGGLYSVALARA
STVDEVLAAILDVGGQAARAAGRGVALVDDGREELRFTRPGGDPAQRPGRWPDVALGAVH
PVAEVVRGARPLFLADREELLARWPVSGLADATAAAGEQAWAMLPLVAVDGSAFGVVTFA
FPAPRTFTAADRAYLAGIAAAGARALERARAHERLVTEAAGAQAALTAAAEERAARQRSD
QRLRLLTRATEIVTAAEDPESSLRAVAELIVAEIADLCAVHLVAARPALAPTAVPAAGDG
ALVTGTERDGGSGQVGGSGQIAGSAPVAGTEPVAGTEPVAGAGPDGAGRTGGAPPTPQLR
PLILAGSAATGAVPSTGAWIAALASSSNPVSQVAARGVGEIVSHAADGWEPPSDIARWIR
QAGAHTTAVLPVVLAGRVAAVLSLTAVGDRAPFTEADLAFLTELAARAGVALERIDREHS
ARSGADELHETLRGAAPVVPRGLQVASRYLPAGAEGDAGGEWFDVIDLGAGRAALVIGGV
RGRGLRTSAVMGQLRAAARACARLDLPPGEVLALLDGVVADMPGHEIATCIYAIAELDTG
VLTLASAGHPPPLVVAPDGLVSRLYMAVGSPLGDVLRDPSGHTDATEYTVRLGRGYLIAL
FTEGLVRGGGRDVDAGVSDLAAVLARTSDASDDNLDALASAACAGLGRDNQPAPADDAVA
LLLARLPDEPTAGPTLLDVTVDGPSGLRAARAQCRLALENANLPVEIIDTVVLVLSELTS
NAVRHGRPPLSVRLRRLGDRAVVEVADGGGRLPRRRHAAPDDEAGRGLDLVSRLAVRHGF
RPIPDGKVVWAEVDLVESVPADPGAP
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccctgttcgtccgggcacccgtcggactcgccctgctcgaccgggccggccgg
ttcgtacgtgtcaacgacgcgctcacccggttggaccgccggtccgcccgggaccatctg
ggccgcaccgtgtccgaggtgctcggtgacagcgatgccgaactcgacgccctgctggcc
cgggtgctgcgtaccggcgagcccgtggtggatctggaggtgggggtcgcgggaccggcc
gggacgccgctgacctggctggcgagctggttcccggtgagcgatccgcagcttggtccg
gtgggggtgtccttcgtcgcgttggacgtcaccggcctgcagatcgccgatcgggagcgg
ctgcgggcacaggcgcgctaccgcgggctcgccgacgccgccggcctggacgtgttccac
gcgacggcggacggcgcgctcgacgtcgacctgcccggctggcgttccgccaccggccag
caaccgggggccctggccggcggcggctggctggccggggtgcatccggacgaccgggac
cgggtcgcgcggctgtggcggggggcggtcgaacgcggcgagaccttcgaggccgagttc
cggatctccgcgccgagcggcgtgggggtcgccgagcgcgtcgtcaccgcccgagtgctg
cccgtgtccgggcccccggaggatgccgccggcggccaggccgccgccggcaacgggccg
gcgcgggacggccggccgaccgagtggctcggcgtcgtccgcgacctcaccggggagcgg
gccgccgaggcggcgcgggccgatgccgatcagcgggccgaggcggccgtcgaacaggcc
gaggcggccgcgcagcgggccgagtccggcgggctgtactccgtcgcgctggcccgggcc
agcacggtcgacgaggtcctcgcggcgatcctggacgtcggcggtcaggcggcgcgggcg
gccgggcgcggggtcgcgctggtcgacgacggccgcgaggagctgcgattcacccgtccc
ggcggggacccggcacagcggcccggccgctggccggacgtggcgctgggagcggtgcat
ccggtggccgaggtggtgcggggagcgcgaccgctgttcctggccgaccgggaggagctg
ctcgctcgctggccggtgtccggtctcgccgacgccaccgcggcggcgggtgagcaggcg
tgggccatgctgccgctggtcgccgtcgacggttcggccttcggggtggtgaccttcgcc
tttccggccccgcggaccttcaccgccgccgaccgggcctacctcgctggcatcgccgca
gccggcgcacgggcgctggaacgggccagggcgcacgagcggctcgtgaccgaggcggcg
ggggctcaggcggcgctcaccgcggcggcggaggagcgtgcggcccggcagcgcagcgac
cagcggctgcgcctgctgacccgggccacggagatcgtgaccgcggccgaggacccggag
tcgtccctgcgggccgtcgcggagctcatcgtggcggagatcgcggacctgtgcgcggtc
cacctggtcgcggcccgtccggctctcgcgcccaccgcggtcccggcggcgggcgacggc
gcgctggtcaccggaaccgagcgggacggcggatccgggcaggtcggcgggtccgggcag
atcgccggatctgcgccggtcgctggaactgaaccggtcgctggaactgaaccggtcgcc
ggggccgggccggacggcgccgggcggacgggtggggcgccgccgactccccagctccgg
ccgctgatcctcgccggttccgccgcgaccggcgccgtgccctcgaccggcgcctggatc
gccgcgctcgcctcgtcgtcgaacccggtcagccaggtcgcggcccggggggtcggggag
atcgtcagccacgccgcggacggctgggagccgccgtccgacatcgcgcgctggatccgg
caggccggtgcccacacgacggccgtgctacccgtggtgctggccggccgggtcgcggcc
gtgctcagcctgaccgccgtcggtgaccgggccccgttcaccgaggccgacctggccttc
ctgaccgagctcgccgcccgcgccggggtcgccctggagcgcatcgaccgcgagcacagc
gcgcgcagcggcgccgacgagctgcacgagaccctgcgcggcgcggcgccggtggtgccc
cgggggttgcaggtggcctcgcgctacctgcccgccggggccgagggggacgccggcggc
gagtggttcgacgtgatcgacctcggggcgggccgggctgccctggtgatcggcggcgtc
cggggccgggggttgcgcacgagcgccgtgatggggcagctacgcgccgccgcgcgggcc
tgcgcccggctcgatctgccacccggcgaggtgctggcgctgctcgacggcgtcgtcgcg
gacatgcccggacacgagatcgcgacctgcatctacgcgatcgccgagctcgacacgggc
gtgctgaccctggccagcgccggccatccgccgcccctcgtggtcgccccggacggcctc
gtctcgcggctctacatggcggtcggctccccgctcggcgacgtcctccgggatccgtcg
gggcacaccgacgccaccgagtacaccgtccgtctgggccggggctacctcatcgccctg
ttcaccgagggcctggtccgcgggggtggccgggacgtcgacgccggcgtctcggacctc
gcggccgtcctggcccgcaccagcgacgcgtccgacgacaacctcgacgcgctggcgagc
gccgcctgcgcgggcctcggccgcgacaaccagccggcacccgccgacgacgccgtggcg
ttgctgctcgcccgcctgcccgacgaaccgaccgccgggcccacgctgctcgacgtcacc
gtcgacgggccgtccgggctgcgggcggcgcgggcacagtgccggctcgcgctggagaac
gccaacctgccggtcgagatcatcgacaccgtcgtcctggtcctgtccgagctgacgagc
aacgccgtgcgccacggccgcccgccgctgtccgtgcggctgcggcggctcggcgaccgg
gccgtcgtcgaggtcgccgacggtggcggccggctgccccggcgccggcacgcagcgccg
gacgacgaggccgggcgcgggctcgacctggtttcccggctcgccgtgcggcacggcttc
cgtccgatccccgacggcaaggtggtctgggcggaggtcgatctggtggagtcggtcccc
gccgatccgggcgcgccgtga
DBGET
integrated database retrieval system
