Frankia alni: FRAAL5734
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Entry
FRAAL5734 CDS
T00384
Name
(GenBank) Conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fal
Frankia alni
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fal03009
]
FRAAL5734
Enzymes [BR:
fal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FRAAL5734
Ribosome biogenesis [BR:
fal03009
]
Prokaryotic type
ribosomal protein modification factors
FRAAL5734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CAJ64366
UniProt:
Q0RDV0
LinkDB
All DBs
Position
complement(6208943..6210580)
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AA seq
545 aa
AA seq
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MSTHVPRRVALVTLGCSRNEVDSEELAGRLAAQGWELVADAADADAVLVNTCGFVDAAKK
DSIDALLAADDLRAGDGEPAGAGPRAVVAVGCLAERYGNELAASLPEADAVLGFDAYPSI
GEHLDAVLGGATVPAHTPRDRRTLLPITPVERGASANVAVHVPGHARGVAGGSAAGSPGR
RRLTAGPVAALKISSGCDRRCAFCAIPSFRGSHVSRPADDVLAEAEWLAGEGARELVLVS
ENSTSYGKDLGDLRALEKLLPQLAAVPGIVRVRTVYLQPAELRPSLLEVLLTTPGLAPYL
DLSFQHASPAVLRRMRRFGGSEHFLDLLDRGRGLLPGLGARSNVIVGFPGETEADVDILA
EFLEAAELDAVGVFGYSDEEGTEAVSLPGKIAEEEIERRRVQITDLVEQLTATRAQERIG
SRVQVLVEEITDGIAAGCAGHQQPDADGSCLVRLPGPAGAAAGPPAGGPSGTGQPGLPGQ
PGQPGVEVGDLIEARVVATEGVDLVAEFTAVLDRARPSAGRGEAAPSATGARATVLVGRP
RADGT
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactcacgtcccgcgccgggtagctctcgtcacgctcggttgttcccggaacgag
gtggattcggaggaactcgccggccggctcgccgcccaggggtgggaactggtcgccgac
gccgccgacgccgacgccgtgctggtcaacacctgcggattcgtcgacgcggcgaagaag
gactccatcgacgccctgctggccgcggacgacctgcgggccggcgacggcgaaccggcc
ggggcgggcccgcgtgcggtggtcgccgtcggctgcctcgcggagcgctacggcaacgag
ctggcggcgagcctgcccgaggccgacgcggtgctgggcttcgacgcctacccgagcatc
ggcgagcatctcgacgcggtcctcggcggcgccacggtgcccgcccacaccccgcgggac
cggcgcaccctgttgccgatcaccccggtggaacggggcgcgtcggcgaacgtcgccgtg
cacgttcccgggcacgccaggggtgttgcgggtgggagtgcagcgggtagcccgggccgg
cgccggttgacggcggggccggtcgccgccctgaagatctccagcggctgcgaccggcgg
tgcgcgttctgcgcgatcccgtcgttccgcggctcgcacgtgtcccgtcccgccgacgac
gtcctcgccgaggcggagtggctggccggcgagggtgcgcgcgagctggtgctggtcagc
gagaactcgacctcctacggcaaggatctcggtgacctgcgggcgctggagaagctgctg
ccgcagcttgccgccgtgccgggcatcgtgcgggtgcggacggtctacctgcagccggcg
gagttgcgcccgtcgctgctcgaggtgctgctgaccacgccgggtctcgccccctacctc
gacctgtcgttccagcacgcgagcccggcggtgctgcgccggatgcgtcggttcggcggc
tccgagcacttcctcgacctgctcgaccgcggtcgcggcctgctgcccggcctcggcgcc
cggtcgaacgtcatcgtcggttttcccggggagaccgaagcggacgtcgacatcctggcg
gagttcctcgaggccgccgagctcgacgcggtcggcgtgttcggctattcggacgaggag
ggcaccgaggcggtctccctgccaggcaagatcgccgaggaggagatcgagcggcgccgg
gtgcagatcaccgatctcgtcgaacagctcaccgccacccgggcgcaggagcggatcggc
agccgggtccaggtcctcgtcgaggagatcaccgacgggatcgccgccgggtgtgccggc
caccagcagcccgatgccgacggctcctgcctggtccgcctgcccggccccgccggtgcc
gcggccggcccgcccgccgggggcccgtccggcaccggccagcccggtctgcccggccag
cccggccagcctggtgtcgaggtgggggacctgatcgaggcccgggtcgtcgcgaccgag
ggggtcgacctggtcgccgagttcaccgcggtgctcgaccgggcccgtccctcggccggg
cggggcgaggccgcgccgtcggcgaccggggcgcgggcgacggtcctggtgggccggccc
cgcgcggatgggacgtga
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