Frankia alni: FRAAL5796
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Entry
FRAAL5796 CDS
T00384
Symbol
smc
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
fal
Frankia alni
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fal03036
]
FRAAL5796 (smc)
Chromosome and associated proteins [BR:
fal03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FRAAL5796 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAJ64428
UniProt:
Q0RDN8
LinkDB
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Position
complement(6280891..6284640)
Genome browser
AA seq
1249 aa
AA seq
DB search
MGPNGSGKSNVVDAIAWVLGEQGAKALRGGTMSDVIFAGTPARPALGRAEVLLTIDNSDG
ALPIEYTEVTVGRLMFRSGESEYTINGTGCRLLDIQELMSDSGIGRELHVIVGQGQLDAV
LHARPEDRRAFIEEAAGVLKHRKRKEKALRKLEAMAANLTRLTDLSAELRRQLGPLGRQA
EIARKAGVIQASLRDARLRLLADELNSARTAIASDVVDEEALRRRLTDSESAQHAAAQRE
AQLQSELAAVVPRAAAAQETWYAMASLRERLLGTRSLATERARLLRIGSDELRGRRDPDE
LEQEAIAVREQEIALTERLERDRELLEEVVVRRADLEAALADEERELIAAARAASSRREE
LARLAGQVEAARSRATGAEEEIARTTEALTAARERDAEAAQSTTALQTELAQMEGAREEL
AERHDAAVAVHASATDRLEMLRAEERAAERDRASWTARRDALQLSLAPADGVAALLEAVA
RVRASDSEPTADTGVPRGGGEGAHDGTSAGEASPARSSGGKRSGPGGRRHRSGAAKDSGP
ADGRRSELPPLDPSFVPLGRLSDVVTVRSGAEVAVAAALGPAADALLVATPTEVLTAFAW
LRQADAGRAAVVIPGTMSDGSEAAGDAHDAGGWPRPGRGRGELDEPVAGMAGPLPEGCVP
VLELVEFIDDRFRFALVSLLEGTVVVDDLAAAELAVRSRPDLRTVTRSGDVLGPAASIGG
SAHPPSAIELRAAADEAEAGVVEAARRAETAHESFEPARTEVARTRSAIDAALAALHGAD
ARYRALSEQVAQLERAWGGAGSEVARLEAARGRAETARDRAYGALSELETALAATSAQPE
IDEPTPAERDRLVSATSAVRAAEVEARLAVRTSEERARGLQGRADGLIRAAASERAARVA
AARRREVRERQAAVAAALGDATQVTLDRLDRSLARAATERAEAEALRRATETNLAAVREQ
ARALAAEVAALRDAAHRDELARAEKRLRAETLETRAMEEFGIGAEDLVAEFGPQVPVPPD
DPDGTPAPFDRAEQTARAAAAEKQLTRLGRINPLALEEFAALQERAAFLSAQLDDIKSTR
RDLLLVVEEVDVRVREVFAAAFADTAREFEVVFATLFPGGEGRLVLTDPDDMLTTGIEVE
ARPPGKKVKRLSLLSGGERSLTALALLLAIFRARPSPFYVLDEVEAALDDRNLGRLLNAI
EGLRQKSQLIIITHQKRTMEIADALYGVAMRGDGVTTVISQRLRDRAAV
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
gtgggcccgaatgggtcgggtaagagcaatgtggtcgatgccatcgcctgggtgctcggg
gagcagggcgccaaggcgttgcggggcggcaccatgtcggacgtcatctttgcgggcaca
cccgcgcgcccggcgcttggtcgggcggaggtgctgctcacgatcgacaactccgacggc
gcgttgccgattgagtacaccgaggtaaccgtcggtcgtctcatgtttcgcagcggggag
agcgaatacacgatcaacggtacgggatgccggctcctcgacatccaggagctcatgagc
gactcggggatcggccgcgagttgcacgtgatcgtgggccagggccagcttgacgccgtg
ctgcacgcacgccccgaagatcgccgtgcgttcatcgaggaggccgccggggttctcaag
caccgcaagcgcaaggagaaggcgctgcgcaagcttgaggcgatggcggcgaacctcacc
cgactcaccgacctctccgcggagctacgtcggcagctcggccccctcggccggcaggcg
gagatcgcgcggaaggccggagtcatccaggcatcgctcagagacgcccggcttcggctg
ctcgcggacgagctgaactctgcccggaccgcgatcgcctcggacgtcgtggacgaggag
gcgctgcggcgacggctcaccgactcggaatcggcgcaacatgccgcagcgcagcgtgag
gcgcagctccagtcggagcttgccgccgtcgtcccccgcgcggccgcggcgcaggagacc
tggtatgcgatggcctccctgcgggagcggttgctgggaacccgctcgctggcgaccgag
cgagcccggctgctgcggatcggatccgatgaactacgaggtcgccgtgatccagatgag
ctcgagcaggaggcgatcgcggtccgggagcaggagatcgcgctcaccgagcggttggaa
cgcgatcgcgagctgctcgaggaggtggtcgtcagacgggcggatctcgaggcagcgctg
gcagacgaggaacgcgagctgatcgccgccgctcgcgccgcgtcctcccggcgtgaggag
ctcgctcggctcgccggtcaggtcgaggccgcgcggtcgagggcgaccggcgcggaggag
gagatcgcgcggacgacggaggccctgacggccgcgcgggagcgcgatgcggaggccgca
cagtccacgaccgcgctgcagacggagctcgcccagatggagggcgctcgagaggaactc
gccgaaaggcacgacgccgccgtggcggtgcacgccagcgcgaccgatcgcctggagatg
ctgcgggccgaggagcgtgcggccgagcgggaccgggcatcctggacggcgcgccgtgat
gcactgcagctttcgctcgcgccagccgacggcgtggcggctctgctcgaggccgtcgcg
cgggtgcgggcctccgacagcgagccgaccgccgacacgggcgtcccgcggggcggcggc
gagggggctcatgacgggacctccgcaggcgaagcgtcgcccgcgaggtcctctggcggg
aagagaagcggacctggtggccgtcggcatcgatcaggtgcggcgaaggactccggcccc
gccgacgggcgacgatccgaactcccgcccctggacccctcttttgtgcccctcggtcgg
ctgtccgacgttgtgaccgtgcggtcgggagccgaggtggcggtggccgcggcgctgggg
ccggccgccgacgcgctgctggtcgccacgccgaccgaggtactgaccgcgttcgcctgg
ctgcggcaggccgatgccggccgagctgcggtggtgattcccgggaccatgagcgacggg
agcgaggccgcaggcgacgcccatgatgccggcggttggccgcgtcccggccggggtcgc
ggcgagctggacgagccggtcgctggcatggcgggcccgctccccgaaggctgcgtgccc
gttctggagctggtggagttcatcgacgaccgcttccgtttcgcgctggtgtcgttgctc
gaaggcaccgtcgtcgtcgacgatctggccgccgccgagctcgccgtccggtctcggccc
gacctgcggactgtcacaaggtccggcgacgtcctcggtcccgcagcgtcgatcgggggc
agcgcacatccgccgtcggcgatcgagctgcgtgcagcggccgacgaggcggaggccgga
gtagtggaagcagctcgacgggccgagacggcgcacgagtccttcgagcccgccaggacc
gaagtggcgcggacccgttcggccatcgacgcggcgctggccgccctgcacggggccgac
gcccggtatcgggcgctgtccgagcaggtcgcacagcttgagcgggcgtggggcggtgcg
ggctcggaggtggcgcggctcgaggccgcccgcggccgcgcggagacggccagggaccgg
gcctatggtgctctgtccgagctggagaccgccctcgccgcgacctcggcgcagccggag
atcgacgagccgacgccggccgagcgggaccggctggtctccgctacctcggccgtgcgg
gccgccgaggtcgaggctcggcttgccgtgcggaccagcgaggaacgggcgcgcggcctg
cagggccgagcggacgggctgatccgggccgcggcgagcgaacgcgcggcccgggttgcc
gccgcccgtcggcgcgaggtgcgcgagcggcaggccgcggtcgcggcggcgcttggggac
gccacccaggtgaccctggatcggttggaccgttcgttggcccgagccgcgaccgagcgt
gcggaggccgaagccctgcgccgggcgaccgagacgaacctggccgccgtgcgcgagcag
gcgcgggcgctcgctgccgaggtcgcggcgctgcgtgatgcggcccaccgcgacgaactg
gcccgcgcggagaagcgtctgcgggcggagacgctcgagaccagggcgatggaggagttc
gggatcggagccgaggacctggtggccgagttcgggccgcaggtgccggttccgcccgac
gatccggacggtacgccggcgccgtttgatcgggccgagcagaccgcgagggcggccgcc
gcggagaagcagttgacccgcctcggccggatcaacccactcgccctggaggagttcgct
gctctgcaggagcgggcggcgttcctgtcggcgcagctcgacgacatcaagagcacccga
cgggacctgctgctcgtggtcgaggaggtcgacgtccgggttcgtgaggtgttcgccgcg
gccttcgccgacaccgcccgggagttcgaggtggtcttcgccaccctcttccccggcggg
gaggggcggctggtgctcacggatcccgacgacatgctgaccaccggaatcgaggtcgag
gcccgcccgccgggcaagaaggtcaagcgactgtcactgctgtcgggtggggagcgatcg
ctgaccgcactcgcgctgctgctggcgatcttccgggctcgtccgtcaccgttctacgtc
ctcgacgaggtcgaggcggcgctggacgatcgcaacctcggccggttgttgaacgccatc
gagggactgcggcagaagtcccaattgatcatcatcactcaccagaagcggaccatggag
atcgccgacgccctgtacggcgtggcgatgcgcggtgacggagtcacgactgtgatcagt
cagcggttgcgggatcgcgcggctgtctga
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