Frankia alni: FRAAL5827
Help
Entry
FRAAL5827 CDS
T00384
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta, NS1 (HU-1)
KO
K03530
DNA-binding protein HU-beta
Organism
fal
Frankia alni
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fal03032
]
FRAAL5827 (hupB)
03036 Chromosome and associated proteins [BR:
fal03036
]
FRAAL5827 (hupB)
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL5827 (hupB)
DNA replication proteins [BR:
fal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FRAAL5827 (hupB)
Chromosome and associated proteins [BR:
fal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FRAAL5827 (hupB)
DNA repair and recombination proteins [BR:
fal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FRAAL5827 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
HU-HIG
Permuted_GreAB-C
HU-CCDC81_euk_2
PEP-utilisers_N
SSPI
Rpf1_C
HU-CCDC81_bac_2
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
CAJ64459
UniProt:
Q0RDK9
LinkDB
All DBs
Position
complement(6310140..6310424)
Genome browser
AA seq
94 aa
AA seq
DB search
MNKSQLVDRIAQQIEGGRSNATKAVDAVFDAIQEAVASGEKVTITGFGVFERVERAARTG
RNPATGEPVHVAASVVPKFRPGSEFKSSVSASGD
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcccagttggttgaccgcatcgcccagcagatcgagggcggacggtcgaac
gccaccaaagccgtcgacgccgtgttcgacgccattcaggaagccgtcgccagcggcgag
aaggtgaccatcaccggattcggcgtgttcgagcgggtcgagcgggccgcgcgcaccggg
cgcaacccggcgacgggcgagcccgtgcacgtcgcggcctcggtggtgccgaagttccgg
cccggctccgagttcaagtcgagcgtctccgcgagcggcgactga
DBGET
integrated database retrieval system