Frankia alni: FRAAL6048
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Entry
FRAAL6048 CDS
T00384
Name
(GenBank) putative ATP-dependent DNA helicase
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAJ64672
UniProt:
Q0RD02
LinkDB
All DBs
Position
complement(6561634..6565146)
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AA seq
1170 aa
AA seq
DB search
MVGSRREAVGPAWCAVGVVAAPAPAAPAGHRLVPTPLTPPRRFVADPAQRRVIEHPGGPL
LVLAGPGTGKTATLVEAVAARIEAGADPRSILVLTFSRRAAGELRERITARLGPGGSASR
GGPGSGGGPGAWTFHAWCLALLRAHDRPAPHGGFRLLSGPERDSRLRELIEGSREDGRPV
WPPQLARALGTRGFTEEVRALLARAREVGLEPVGLAQLARRTDRPDWAALAEFYEMYLDV
FGFEGALDYADLVHRAVVVAEGAEAGEALRARYRHVFVDEYQDTDPAQERLLRAVAGGGR
DLVVFGDPDQSIYAFRGAEVAGLLDFPQRFGTPGRGGGAPIVALRTGRRMAPAPLLASRH
VARRIPAAGLPVAEIRAHRDLIGRTDLGAGRVQVRTYPSAGAEAEAVADLLRREHLENAT
PWPAMAVLVRTADRIARLRRVLTAAGVPVSVDGDDLPVAQEPAAALLLLALRCADNPAGA
LTADAARTLLTSPLGGADPAGLRELGRALRAFDRDAGAGDRDAGAGDRDAGGGDRDAGAR
QPAASAELVRQAVADPDRWLVRVADPVARPARRVGDLLVVARRALREPAGSPEQALWALW
SASGWQQALVAASAAGGAAGRAADRDLDAVVALFDAVARLAQRRGPGTGAASLVDELGRQ
QIAADAIAPVGEDARRRGVRLLTAHRAKGLEWDVVAVCGVQDGIWPDLRERHSLLGAEQL
DAPARGGLRPPLTRQDLLADERRLFYVALTRARRRLLVTAVNSPDDDGSLPSRLLDELGV
AVENISGRPARPLTLVGLVATLRRLATEPTSSPALRAAARRRLAALAAARDDAHRPLVPA
AHPTTWWGLLDVTDSDVPVVAPGAPLRLSGSSLSSIGTCSLRWFLEHEAHAVTVASTAQG
FGKVVHALADEVTTGRTPADLAALDARLDTVWRHLDYEARWRSDQERAAAREALARFLAW
HAGERGRRVVDAEVRFTCRLHVAGREVMLRGFIDRLELDDAGRVHVIDFKTGRSAPGRAE
LATHPQLGSYQLAVRTGALDAAIAAATPAAGRPAAVDPAAVDPAAGDPAAGGPAVATSAV
PGGAELVQLRRDAGGTGAGPRLPGEAPGPPEVQAQEALPAEGPTWMDDVLGEAVRTIDAE
AFRPTPGEHCTMCTFQTSCPTRPEGRQVIE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggagccgtcgcgaggctgtcggacccgcgtggtgtgctgtcggggtggttgcc
gcacctgcccccgccgcgcccgccggccaccggctcgtcccgacgccgctcacgccgccg
cgccggttcgtcgccgacccggcgcagcgccgggtcatcgagcacccggggggcccgctg
ctggtgctcgccggcccgggcacgggtaagacggcgaccctggtcgaggcggtcgccgcc
cggatcgaggccggagcggacccacggtcgatcttggtcctcaccttcagccgccgggcc
gcgggcgaactgcgggagcggatcaccgcccggttgggtcccggcggctccgcctccagg
ggcggccccggtagcgggggcgggccgggggcgtggacctttcacgcctggtgcctggcg
ctgctgcgggcgcacgatcggccggcgccccacggcgggttccggctgctgtcgggcccg
gagcgggacagccggctgcgggagctcatcgagggctcgcgcgaggacggccgtcccgtc
tggcccccgcagctcgcccgcgccctgggtacccgcggcttcaccgaggaggtgcgggcg
ctgctggcgcgggcccgcgaggtcggcctggagcccgtgggcctggcccagctggcccgg
cgcaccgaccggccggactgggccgccctcgccgagttctacgagatgtacctcgacgtg
ttcggctttgagggcgcgctcgactacgccgacctggtgcaccgggccgtcgtcgtcgcc
gagggcgccgaggcgggcgaggcgctgcgcgcccgctatcgccacgtcttcgtcgacgag
taccaggacaccgaccccgctcaggagcggctgctgcgcgcggtcgccggcggcgggcgc
gacctggtcgtcttcggcgatcccgaccagtccatctacgccttccgcggggcggaggtc
gccggcctgctcgacttcccgcagcggttcggcacgccggggcgcggtggcggggcgccg
atcgtcgcgctgcgcaccggccgacggatggcgcccgccccgctgctggcgagccggcac
gtggccaggcgaatcccggcggccgggctcccggtggccgagatccgggcgcaccgcgac
ctgatcgggcgcaccgacctcggcgcgggccgggtccaggtccggacctacccgagtgcc
ggggcggaggcggaggccgtcgccgacctgctgcgccgcgagcacctggagaacgccacc
ccctggcccgcgatggcggtcctcgtccgcaccgcggaccgcatcgcccggctgcgccgg
gtgctgaccgccgcgggcgtgccggtcagcgtcgacggcgacgacctgcccgtcgcgcag
gaacccgccgcggcgctgctgctgctggcgttgcgttgcgcggacaaccccgccggcgcg
ctcaccgccgatgccgcccgcaccctgctcacctccccgctcggcggggcggacccggcg
ggcctgcgcgagttgggccgcgcgctgcgtgccttcgatcgcgacgcgggtgccggcgat
cgcgacgcgggtgccggcgatcgtgacgcgggtggcggcgatcgtgacgccggtgcccgg
cagcccgccgcgtcggccgagctggtccgccaggctgtcgccgatccggaccgctggctg
gtgcgcgtcgccgatccggtcgcccggcccgcccgccgggtcggcgacctgctcgtcgtg
gcccgccgggcgctgcgggagccggccggctcgcccgagcaggcgctgtgggcgctgtgg
tcggccagcggatggcagcaggcgctggtggcggcgtcggcggccggcggggcggcgggg
cgcgcagccgaccgcgacctcgacgcggtggtggcgctgttcgacgccgtcgcccgcctc
gcccagcggcgcgggcccggcaccggcgccgcgtcgctggtcgacgagctgggccgtcag
cagatcgccgccgacgccatcgcgccggtgggggaggacgcccgccgccgcggcgtgcgg
ctgctgaccgcgcaccgcgccaagggcctggaatgggacgtcgtcgccgtctgcggggtg
caggacgggatctggccggacctgcgggagcggcattcgctgctcggcgccgagcagctc
gacgcacccgcccgcggcggcctgcgcccgccgctgacccgccaggacctgctcgccgac
gagcgccggctgttctacgtcgcgctcacccgggcccggcggcgtctgctggtcaccgcc
gtcaacagcccggacgacgacggcagcctgcccagccggctgctcgacgagctcggcgtc
gccgtcgagaacatctccggtcgcccggcccggccgctgaccctcgtcggcctcgtcgcg
acgctgcgccggctggcgaccgagccgacgtcgagtccggccctgcgcgccgccgcccgc
cgccgcctcgccgccctcgccgccgcccgcgacgacgcccaccgcccgctcgtccccgcc
gcgcacccgaccacctggtgggggctgctcgacgtgaccgactccgacgtgccggtcgtc
gcgccgggcgcgccgctgcggctgtccggctcgtcgttgtcgagcatcggcacctgctca
ctgcggtggttcctggagcacgaggcgcacgcggtcaccgtcgcctcgaccgcgcagggt
ttcggcaaggtggtgcacgccctcgccgacgaggtgaccaccgggcgcaccccggcggat
ctggccgctctcgacgcccggctcgacaccgtctggcggcatctcgactacgaggcccgc
tggcgcagcgaccaggagcgggccgccgcccgggaggcgctggcccgcttcctggcctgg
cacgccggcgagcgcgggcgccgggtcgtcgacgcggaggtccggttcacctgccggctc
cacgtcgcgggccgggaggtgatgctgcgcgggttcatcgaccggctggagctcgacgac
gccggccgggtgcatgtcatcgacttcaagaccggccgcagcgcgcccggccgcgccgag
ctcgccacccacccccagctcggcagctaccagctcgccgtgcggaccggcgccctcgac
gcggcgatcgccgcggccactcccgccgccggtcgccccgccgctgtcgacccggccgct
gtggatccggctgctggcgacccggctgctggcggtcccgccgtggcgacttccgcggtg
cccggcggcgccgagctcgtccagcttcgccgcgatgccggtggcaccggcgccgggccc
cgcctgcccggcgaggcacccggcccgcccgaggtccaggcgcaggaggccctgcccgcc
gagggacccacctggatggacgatgtcctcggcgaggcggtgcgcaccatcgatgcggag
gcgttccggccgacgccgggcgagcactgcacgatgtgcacgttccagacgagctgcccc
acccgccccgagggacggcaggtgatcgagtga
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