Frankia alni: FRAAL6123
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Entry
FRAAL6123 CDS
T00384
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase (SDAP)
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fal
Frankia alni
Pathway
fal00300
Lysine biosynthesis
fal01100
Metabolic pathways
fal01120
Microbial metabolism in diverse environments
fal01230
Biosynthesis of amino acids
Module
fal_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FRAAL6123 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fal01002
]
FRAAL6123 (dapE)
Enzymes [BR:
fal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FRAAL6123 (dapE)
Peptidases and inhibitors [BR:
fal01002
]
Metallo peptidases
Family M20
FRAAL6123 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CAJ64746
UniProt:
Q0RCS8
LinkDB
All DBs
Position
complement(6647101..6648192)
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AA seq
363 aa
AA seq
DB search
MDLDLTAPVGELTRRLVDVPSVSGEEAALADAVEKALAAVDGLRVARDGDAVVARTFLGR
PSRILLAGHLDTVPLADNLPARVVGGRLYGCGTSDMKAGVAIALRLAATLPLTDASAPAG
VGALRHDVTWICYDNEEVTADRNGLRRLAARHRDWLDADLAILMEPTSGEVEAGCQGTLR
AVVTLPGTRAHSARSWLGDNAVHKAAEVLRRLGEYRARTVTLDGCTYREGLSAVRIDGGV
AGNVIPDLCRVTVNFRFAPDRTVENAFAHVREVFDGYDLELTDRAGGAPPGLAAPAAAAF
VAATGRVPVAKYGWTDVARFAELGIPALNYGPGDPNLAHTRDEYVELAAIDEGERLLRRY
LTS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggatctggatctcaccgccccggtgggcgagctcactcggcggctggtcgacgtgccg
tccgtcagcggcgaggaggccgcgctggcggacgcggtggagaaggcgctggcggcggtc
gacgggctgcgggtcgcccgcgacggtgacgccgtggtggcccggaccttcctcggccgg
ccgtcgcggatcctgctcgcggggcatctggacacggtcccgctggcggacaacctcccc
gcgcgggtggtgggcgggcgcctctacggctgcggcacctccgacatgaaggcgggcgtg
gcgatcgcgctgcggctcgcggccaccctgccgctcaccgatgcctccgcccccgccggt
gtcggcgcgctgcggcatgacgtcacctggatctgctacgacaacgaggaggtcacggcg
gaccgcaacgggctgcgccgcctcgccgcccggcaccgggactggctggacgcggacctc
gccatcctcatggagcccacctccggcgaggtggaggccggctgccagggcacgctgcgc
gccgtcgtcacgttgcccggcacccgggcgcactccgcccgttcctggctcggtgacaac
gccgtccacaaggccgccgaggtcctgcgtcggctcggcgagtaccgggcccggacggtg
acgctcgacggatgcacctaccgtgaggggttgtccgcggtccgcatcgacggcggcgtg
gccggcaacgtgatccccgacctgtgccgggtgacggtgaacttccgtttcgcgccggat
cgcacggtcgagaacgccttcgcccatgtccgggaggtcttcgacggctacgacctggag
ctgaccgaccgggcgggcggcgcgccccccgggcttgccgcaccggccgcggccgccttc
gtggccgccaccggtcgcgtcccggtggcgaagtacggctggacggacgtcgcgcgcttc
gccgagctcggcatcccggcgctgaactacggcccgggtgacccgaacctcgcccacacc
cgcgacgagtacgtcgaactcgccgcgatcgacgagggcgaacggctgctgcgccgctac
ctgacctcctga
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