Frankia alni: FRAAL6148
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Entry
FRAAL6148 CDS
T00384
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease VII (small subunit)
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
fal
Frankia alni
Pathway
fal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FRAAL6148 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL6148 (xseB)
Enzymes [BR:
fal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FRAAL6148 (xseB)
DNA repair and recombination proteins [BR:
fal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FRAAL6148 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF2089
YebU_pre-PUA_dom
Motif
Other DBs
NCBI-ProteinID:
CAJ64771
UniProt:
Q0RCQ3
LinkDB
All DBs
Position
6672310..6672576
Genome browser
AA seq
88 aa
AA seq
DB search
MGSPATAGGTQAERGAQAERGAQAAPTISYETARAELEDVVRQLEAGGVTLEQSLALWER
GEELARTCQALLDGARARLAAADPTRPA
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagcccggcgaccgccggcggcacgcaggcggagcgcggcgcccaggcggagcgc
ggcgcccaggcggcgccgacgatcagttacgagaccgcccgtgccgagttggaggacgtc
gtccgccagctggaggccggcggggtgacgctggagcagtcgctggcgctgtgggagcgc
ggcgaggagctggccaggacctgccaggccctgctcgacggcgcccgcgcccggctcgcc
gccgccgaccccacccgccccgcctga
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