Frankia alni: FRAAL6333
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Entry
FRAAL6333 CDS
T00384
Name
(GenBank) hypothetical protein; Putative conjugal transfer protein traA
Organism
fal
Frankia alni
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
HTH_17
TraI_hel_assoc_N
UvrD_C_2
AAA_5
AAA_22
zf-C2H2_9
AbiEi_4
MerR
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
CAJ64956
UniProt:
Q0RC71
LinkDB
All DBs
Position
complement(6885254..6889669)
Genome browser
AA seq
1471 aa
AA seq
DB search
MLSFLVERINGVGCIPGLGWRPRPVIVTVKVLGLRAAAGTTVAGAVWRIVDYLHGGTPGE
AARFAAVGGTQSAKSSGLARYYTGGVARGSAAALVGLRPGAAVPRERLARLLAGQHATSG
RPLVPATGSAGRAAHSRRLDGGRGSGEWLSLAEAARIAGVSARYLRRLAARTSRDDAGTV
DAGASDTAGRPAADDDGTDAGSDRDRLAAAKDSAGRWRVHRDELARFLEEREPPTVVLGF
DVTASAPKSVSLLWAFGDDDLRRDLAEAMNVAVDAAIGYLERQAGVGLVDGHNRPGVGLA
GVSFLHDISRAEEPHLHIHTVLANAVPIPLLDEDGEPLRDGAGRPRMVWRTVDSELLHAH
VKTAGYVAAAVLRHELSARRGLQWGPVRNGVAELAGLPADLLAVFSSRRAQIDAELAELV
ASGATDGPALREAVQRGTRAPKRAQADAEIRTAQHARLEAAGWTAADVLAAGARTDYRPT
AIGPDDLAELAELLTGPDGLTARSATFTARDVAQAVAAWGVDRLDATDIDRLTAHILADA
RLAMVDEDTPRRRRDPEPIYTTLDLLDAEDNVLALCEAGRTAYAGREHRLIGPDELEAAL
AGHLDPRREYGAGHVEPAVLAVEQVDAVRALLTSTDLVRVLVGPAGSGKTEAMRLLVAVL
RDAGRTVLGAAHGGRQTEELTGRLGIDGRVVAGWLTLLDHADRPADIWPPGTMLILDEAT
HVTTRNAARLLRYATDTGTVILALGDPAQLGAIGPGGWFAHLAATLPDVATLTTVHRQAG
AGMNGVRAALAGLRAGAPDQVRRAMARLAADGRLHRFHDRPSLLAAIVEDWHDERSTVRS
AATGANRARVDANRARVGAASGADHAPGRSRRGADHSRHVDLPRMMAGDHGTVEWLNRAA
QLRRMQAGELDPDLFLEVAGRRFHVGDEVITLTQAGHTLIPAGRPASAYIRTGTIGTVLA
IDSGPATDDRPEGRTLTVDFPGKGVVSIGWDYLTHVFPDGRDGGLTHAYAITAHKAQGST
MATARPVVTDRTSRPGLYVMLSRARTDLAAYLIDSDELAAPGDTEDLLPVVPTRGDPLDR
LAGRLAASRTDRLVQALDPAAAAVAQLRREYTLAELTALRRQLRPATGGGQSSRTPSFRS
RPGAHNSGLLGADGDPIIGAVSAGRGAVEVDRGANGARPGANSAGDWPSRALDGDGKEID
PVVLARAERSAEAAVAAASLADPPAILLERIGPRPAGGPVRRAWDDAVASLAIYQVRHAA
HLEPGDPGPPPPDDHDGDVRHRWEEQHDLAAALVEAWASALHPTGRPDIRGPAAERATAA
IHAFLDAGSTPAALSRALAAIDHGAIRDGLAIVDHRLARLCETADVDPAAYADPPSPGAR
HDWQRTVHLLDRAEIHHLASRPNAELAFELRTLRAAGGLPASTEPDWAQGRRARLLGAAL
GLQADAATLHAELGPPTDPSGHAGAATHFEL
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
ttgctttccttcttggttgagcggataaacggagtcgggtgcatcccgggtttgggttgg
aggccgcgtccggtgattgtcacggtgaaggtgctgggtttgcgcgccgccgccgggacg
acggtggcgggcgcggtgtggcgaatcgtcgactacctgcacggcggcacgcccggtgag
gccgcccggttcgccgcggtgggcggtacgcagtcggccaagagttccggcctggcgcgc
tactacacgggcggggtcgcgcggggttcggcggctgcgctggtcggcctgcggccggga
gccgctgtgccgcgcgagcgcctcgcccggttgctcgctggtcagcacgccacgagcggg
agaccgctcgtgccggcgaccggatcggccggccgcgccgctcacagcaggcgccttgac
ggcggccggggatccggcgagtggttgtcgctggcggaggctgcccggatcgccggtgtc
agcgcacgttacctgcggcggctcgcggcgcggaccagccgcgatgacgctgggaccgtc
gacgccggagcatcggacacggcgggccgtccggcggccgacgacgacgggaccgacgct
gggtcggaccgggatcggctggcggcggcgaaggactccgccggccggtggcgggtgcac
cgcgacgaactcgcccgcttcctcgaggaacgcgagccgcccacggtggtgcttggattc
gacgtgaccgcctcggcgccgaaatcagtgagcctgctctgggcattcggtgacgatgac
ctgcggcgtgacctcgccgaggcgatgaatgtcgcggtggatgcggcgatcggctatctg
gagcggcaggccggagtcgggctggtcgacggccataaccggcctggggtgggcctggcc
ggggtgtctttcctgcacgacatttcccgggccgaggaaccccatctgcacatccacacc
gtgctggcgaacgcggttcccatcccgctcctcgacgaggacggcgagccgctgcgagat
ggcgccggacgacctcggatggtgtggcggacggtcgacagcgagctgctgcacgcacac
gtgaagaccgccggctatgtggcggcggcggtgctgcgccacgaactgtcggcccgtcgg
gggctgcagtggggaccggtccggaacggagtcgccgaactggccgggctgccggcggac
ctgctggcggtgttctcctcgcggcgggcgcagatcgacgcggaactcgccgagctggtc
gccagcggcgcaaccgacggcccggctctacgcgaggcggtccagagggggacccgggcg
ccgaaacgggcgcaggccgacgcggagatccgcaccgcccagcacgcccggctcgaagcc
gcgggatggacggcggcggacgtcctggcagccggcgcgcggaccgactaccggccgacg
gccatcggccccgacgatctggccgaactcgccgagctgctcaccggaccggacggactc
accgcgcggtccgcgaccttcaccgcccgtgatgttgcccaggctgtggccgcctggggc
gtggaccggctcgacgccaccgacatcgaccggctcaccgcccacatcctcgccgatgcc
cggctggccatggtcgacgaggacaccccccgtcggcgccgcgatcccgaacccatctac
accacgctcgatctcctcgacgccgaggacaacgtgctcgccctctgcgaggccgggcgc
accgcctacgccggccgggagcatcggctcatcggaccggacgagctggaagccgccctg
gcggggcacctcgacccgcgccgcgagtacggcgcggggcacgtcgagccggcggtgctg
gctgttgagcaggtggacgcggtccgggcgctgctgacctccaccgatctggttcgggtg
ctcgtcggaccggcgggctcgggcaagaccgaggcgatgcggctcctggtcgccgtacta
cgggacgctgggcggaccgtgctgggagcggcgcacggcggccggcagaccgaggaactc
accggccggcttggcatcgacggtcgggtggtcgccggctggctcaccctcctcgaccac
gccgaccggccggcagacatctggccgcccggcacgatgctcatcctcgacgaggccacc
cacgtcaccacccgcaatgccgcgcgcctcctgcgctacgcgaccgacaccggcacggtc
atcctcgccctgggcgaccccgcccagctcggcgcgatcggcccgggcggctggttcgcc
catctcgccgccaccctgcccgacgtcgcgaccctgaccaccgtgcatcgccaggccgga
gcgggcatgaacggggtgcgcgccgccctggccggcctgcgcgctggagcacccgaccag
gtgcgccgcgccatggcgcggctggccgccgacggccggctccaccgcttccacgaccgg
ccgagcctgctcgccgccatcgtcgaggactggcacgacgaacgaagcaccgtccgcagc
gcggccaccggcgcgaaccgcgccagagtcgacgcgaaccgcgccagagtcggcgcggca
tccggcgcggaccacgcgccggggaggagccggcgcggcgctgaccactcgcggcacgtc
gatctgccgcggatgatggcgggcgatcacgggacggtcgagtggctcaaccgggccgcg
cagcttcgccggatgcaggccggtgagctcgacccggacctgttcctggaggtcgccggc
cgccggttccacgtcggcgacgaggtcatcaccctcacccaggccggccacacgctcatc
cccgccggcagaccggcgtcggcctacatccgcaccggcacgatcgggacggtcctcgcc
atcgactccgggccggctacggacgaccggccggagggccggacgctgactgtcgacttc
cccggcaagggcgtcgtgagcatcggctgggactacctcacccacgtcttccccgacggt
cgcgacggcgggctgacgcacgcctacgcgatcacggcgcacaaggcgcagggcagcacg
atggccaccgcccgaccggtcgtcactgaccgcacgagccgacccggcctgtacgtcatg
ctttcgcgcgcccgcaccgacctggccgcctacctcatcgacagtgacgagcttgctgcg
ccgggcgacaccgaggatctgctgcccgtcgtacccacccgcggtgacccgctcgaccgg
ctcgccggccgcctggccgcctcccggaccgaccggctcgtccaggccctcgacccggcc
gcggcggccgtcgcccagctgcgccgtgagtacaccctggccgagctgaccgccctgcgc
cgccaactccgccctgccaccggcggtgggcaatccagcaggaccccgtcgttcaggtcg
cgccccggcgcgcacaacagcggtctcctcggcgcggatggcgatccgatcatcggcgcg
gtcagtgcagggcgcggcgcggtggaggtggatcgtggcgcgaacggcgcgagacccggc
gcgaacagcgcgggtgactggccctcgagggcgcttgacggggacggcaaagagatcgat
ccggtggtgctcgcgcgggcggagcggtccgcggaggccgccgtggccgccgcgtcgctc
gccgatccaccggccatcctgctcgaacgcatcggacctcgtcccgcgggtggaccggtc
cgccgggcctgggacgacgccgtggcgagtctcgcgatctaccaggtgcgccacgctgct
cacctcgaaccgggagatcccggaccgccaccgcccgacgaccacgacggcgacgttcgc
caccgctgggaggaacagcacgacctcgccgccgctctcgtcgaggcatgggcatcggcg
ctgcaccccaccggccggccggacatccgtggtccggcggccgaacgcgcaaccgcagca
atccacgccttcctcgacgccggatcgacccccgccgccctcagccgggccctggcggcg
atcgaccatggtgccatccgcgacggtctcgccatcgtcgaccatcggctcgcccggctc
tgcgagaccgccgacgttgacccggctgcctacgccgatccgccgtcgcccggagcccgc
cacgactggcagcgcaccgtgcacctcctcgaccgcgccgagatccaccacctggccagc
cgaccgaacgctgagctggccttcgagctacgcacgctccgggcggcgggcggactaccc
gcgtccacagagccggactgggctcagggcagacgagcacggctcctcggcgccgccctc
ggcctgcaagctgacgccgcgaccctccacgccgagctcggaccgcccaccgacccgtcc
ggccacgcgggcgcagctacgcacttcgagctctga
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