Frankia alni: FRAAL6736
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Entry
FRAAL6736 CDS
T00384
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fal
Frankia alni
Pathway
fal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FRAAL6736 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fal03400
]
FRAAL6736 (mutM)
Enzymes [BR:
fal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FRAAL6736 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FRAAL6736 (mutM)
DNA repair and recombination proteins [BR:
fal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FRAAL6736 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CAJ65359
UniProt:
Q0RB29
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All DBs
Position
7346388..7347266
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AA seq
292 aa
AA seq
DB search
MPELPEVDALAAFLRETALGRVVERVEPVAVSALKTFDPPVSALHGAALAAVERHGKFLD
LVFALPTGERLDLVTHLARAGWLRWKPSQPAAPARPGRGPLALRVTFDDRSGFDLTEAGT
QKRLAVYVVRDPAEVPGIARLGLDPLGADFTVAALEEILAAAGRAQLKGVLTDQSRLAGV
GNAYSDEALWTARLSPYKPASGLSAAETASLHAALVGVLTAARDSAAGLAAGELKAEKKA
NLSVHGRAGSPCPRCGDTVREVSFADRALQYCPTCQTGGRTLADRRLSRLLK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtcgacgccctcgccgccttcctgcgcgagacggcgctgggc
cgggtcgtcgagcgggtcgagccggtcgccgtgagcgccctgaagacgttcgacccgccg
gtgtccgcgctgcacggggccgcgctcgccgcggtcgagcggcacggcaagttcctcgac
ctcgtcttcgcccttcccaccggggagcgcctcgacctcgtcacccacctggcccgggcc
ggctggctgcgctggaagccgagccaaccggcggcgccggcacgccccgggcggggtccg
ctggcgttgcgggtgaccttcgacgaccgcagcggcttcgacctcaccgaggccggcacc
cagaagcggctggccgtgtatgtggtccgcgaccccgccgaggtgcccggcatcgcccgg
ctcggcctcgacccgctcggggcggacttcaccgtggccgcgctcgaggagatcctcgcc
gccgccgggcgcgcccagctcaagggggtgctcaccgaccagtctcgcctggccggcgtc
ggcaacgcctactccgacgaggcgctgtggacggcgcggctgtcgccgtacaagccggcc
tcggggctgtcggcggcggagaccgcgagcctgcacgccgcgctcgtcggggtgctcacc
gctgcccgcgacagcgccgccgggctcgccgccggcgagctgaaggccgagaagaaggcg
aacctgtcggtgcacggacgggccgggtcgccctgcccacgctgcggcgacaccgtgcgg
gaggtctcgttcgccgaccgggccctgcagtactgccccacctgccagaccggcgggcgg
acgctcgccgatcgccggctgtcccgactgctgaaatag
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