Flavobacterium album: HYN59_10625
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Entry
HYN59_10625 CDS
T06577
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
falb
Flavobacterium album
Pathway
falb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
falb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN59_10625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
falb03019
]
HYN59_10625
Enzymes [BR:
falb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HYN59_10625
Messenger RNA biogenesis [BR:
falb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYN59_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ERCC3_RAD25_C
CMS1
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
AWH85536
UniProt:
A0A2S1QYP1
LinkDB
All DBs
Position
complement(2381417..2382676)
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AA seq
419 aa
AA seq
DB search
MTFEDLNLLKNIHQALIEEGYETPTPIQQQAIPVILEGNDLVGCAQTGTGKTAAFAIPIL
NSLHRIVGSAKKVKHIRTLVVTPTRELALQIGASFDTYGKYTNIRQLTIFGGVNQVAQTD
QLRKGVDILIATPGRLLDLHKQGFINLDHLHTLVLDEADQMLDMGFINDVKKIIKLTPTN
RQTLLFSATMPIAIRELADTFLTTPKYVSVTPVSSTAEKVKQQVYFVDKGDKRKLLYHLI
RNEHLSNVLVFTRTKHGADNVVKALKKNGVNAEAIHGDKSQNARVRVLEGFKNKEVSVLV
ATDIAARGIDIESLPYVINFDLPNIPETYVHRIGRTGRAGNEGLAISFCAKDEQPYLKDI
EKLIRMKIKVIEGHPYPYGSGEESEKPAAEKKPDLRNKNKSQSNSRKSDASKKNKKRWY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgaagatcttaatttactaaaaaatatccatcaggcccttattgaagaaggg
tatgaaacccctacacctatacagcagcaggcaatccctgtcatactcgaagggaacgac
cttgtaggctgcgcacagaccggaaccggaaaaacggccgcttttgccataccgatactg
aactctttacaccgtattgttggctctgcgaaaaaagtaaagcacatccgtacactggta
gtaacgccaacacgcgagcttgccctgcagataggtgccagctttgatacgtacggaaag
tataccaacatccgccagctaactatttttggcggcgtaaaccaggtagcgcaaaccgac
cagctgcgcaaaggcgttgacatccttatcgctacgcccggaagattgctcgacctgcac
aagcagggattcatcaaccttgaccacctgcacacactggtgctcgatgaagccgaccag
atgctggacatgggcttcatcaatgatgtgaaaaaaattatcaagcttacgccaacaaac
aggcaaacgcttttgttctcggctaccatgccgatagcgatacgcgaacttgccgatacc
ttccttaccacaccgaaatatgtttcggtaacccccgtatcctctactgccgagaaagta
aaacagcaggtatattttgttgataaaggcgataagcgcaagctgttgtaccaccttata
cgcaatgagcacctttccaacgtgcttgtttttacccggacaaagcacggtgccgataat
gtggtaaaagcccttaaaaagaacggcgtgaacgccgaggccatacacggtgataagtcg
cagaatgcaagggtgcgcgtactggaaggctttaagaacaaagaagtctccgtactggta
gccaccgatattgcagcacgtggtattgatatcgagagcctgccctacgtgataaatttc
gaccttccgaatattcctgaaacgtatgtacaccgtatagggcgtaccgggcgtgccgga
aacgaagggcttgccatatcgttctgtgcgaaagacgagcagccgtacctgaaagatata
gaaaaactaataaggatgaagatcaaggtaatcgaaggccatccttatccttatggatca
ggcgaagaatcagaaaaaccggcagcagaaaagaaacccgatcttcgtaataagaataag
agccaaagcaattcgagaaaatcggatgcttcgaaaaagaataaaaaacgctggtactaa
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