Flavobacterium album: HYN59_11945
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Entry
HYN59_11945 CDS
T06577
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
falb
Flavobacterium album
Pathway
falb03420
Nucleotide excision repair
falb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
falb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN59_11945
03430 Mismatch repair
HYN59_11945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
falb03400
]
HYN59_11945
Enzymes [BR:
falb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN59_11945
DNA repair and recombination proteins [BR:
falb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN59_11945
MMR (mismatch excision repair)
Other MMR factors
HYN59_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
DEAD
ERF
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWH87009
UniProt:
A0A2S1R350
LinkDB
All DBs
Position
2656687..2659020
Genome browser
AA seq
777 aa
AA seq
DB search
MHKYISQLNEAQQAPTLQKDGPMIVIAGAGSGKTRVLTIRIAYLMSQGVDAFNILALTFT
NKAAKEMKKRISDIVGASEAKNLWMGTFHSIFAKILRFEADKLGFPSNFTIYDTQDSVRL
ISAIIKEKQLDKDVYKPKQVLGRISSYKNSLITVKAYFNNPELQEADAMSKKPRLGEIYE
EYVNRCFKSGAMDFDDLLLRTNELLSRFPDVLMKYQDRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSSKNIVEAANA
IIDKNKTKLDKVVWTANDEGHKIKVHRSLTDGEEGRFVASTIFEEKMRNQLKNGQFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLVINPKDEEALIRVINYP
ARGIGDSTVEKLTVAANHYKRSIFEVMENIDKIDLKLNGGTKAKLQDFVTMIKSFQIINE
NQDAFYLAEHVAKKTGLIQELKKDATPEGIARIENIEELLNGIRDFIEGQREVDGARGAL
SEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPYVFIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLVDSEPSRFIEEITDNFLEYLTPTENNY
RYKPMIDADIFGDVDKSKLRQVKPTNTPPPAWVTSNDPKPDMNVRRLKPLEGRAPVSTTP
MPDSKLVPGNIVMHERFGKGEVLNLEGVGADKKAEIRFEVGGIKKLLLRFAKLDIIS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atccacaagtatataagccagttgaatgaagcccagcaggcgccgacattgcagaaggat
gggccgatgatcgtgatagcaggtgcggggtcgggaaagacacgtgtactcaccatccgc
attgcgtaccttatgagccagggcgttgatgcgttcaacatactcgcacttaccttcacc
aacaaggcagccaaggaaatgaagaagcgtatctcggatatcgtaggtgcatccgaagcg
aagaacctttggatggggacattccactcgatatttgcaaagatattgcgctttgaggcc
gacaagctcggttttccctcgaactttaccatatacgacacgcaggacagtgtgcgccta
atcagcgccatcatcaaagagaagcagctggataaggatgtgtacaaacccaagcaggta
ctggggcgcatttcatcctataaaaacagcctcatcacggtaaaggcctatttcaataac
cctgaattgcaggaagccgacgccatgtctaaaaagccgcgccttggggaaatttatgaa
gaatatgtgaaccgctgctttaagtcgggcgcaatggactttgacgaccttttgctgcgt
acgaatgagctgctaagccgtttccctgatgtgctgatgaagtaccaggaccgtttccgc
tatatactggtggatgagtaccaggataccaaccattcgcagtaccttatcgtaagggcg
ctttcggacaggttccagaacatctgcgtggtcggtgacgatgcgcagagtatctatgct
ttccgtggagcgaacatcaacaacattctgaacttccagaaggattatgacaatgtgcag
atgtaccgactggaacagaattaccgttccagcaaaaatatagtcgaggcagccaacgcc
attatcgacaagaacaagaccaagctggacaaagtggtttggacagccaatgacgaaggc
cacaagataaaagtgcaccgcagccttaccgatggtgaggaaggccgttttgtggccagc
accatttttgaggaaaaaatgcgcaaccaactgaagaacggccagtttgctatattatac
cgtaccaatgcccagtcgcgtgcgatggaggatgccttgcgcaagcgcgatatcccttac
cgcatttatggtgggctgtcgttttaccaaaggaaagagatcaaggacgtgctggcctac
ctgaggctcgttatcaacccgaaggatgaggaagcgcttatccgcgttatcaactacccg
gcacgcggtattggcgacagcaccgttgaaaagcttactgtagctgccaaccattataag
cgctcgatatttgaggtgatggagaacatcgacaagatcgacctgaagctcaacggcggc
acaaaggcgaaactacaggattttgtcacgatgataaagagtttccagatcatcaatgag
aaccaggatgctttttaccttgccgagcacgttgccaaaaaaacagggctaattcaggaa
ctgaagaaagacgctacacccgaaggcatagcccgtatagagaatatcgaagaacttttg
aacggtatccgcgacttcattgaagggcagcgggaagtggacggagcccggggagcgcta
tcggaatttctagaggacgtggctttggctaccgaccttgataaagataccggtgatgac
gaccgtgtggcgctgatgaccattcaccttgcgaaaggccttgagttcccgtatgtgttt
attgtaggtatggaagaggacctgtttccaagtgctatgagcatgaatacccgcagcgaa
ctggaggaggagcggaggctgttttatgtagcgcttacccgcgctgagcaccaggcctat
ctgacctatgcacaatcgcgttaccgctggggcaaactggtagatagcgaaccgtcacga
tttatagaagagataaccgataatttcctggaataccttacgccgacagaaaataattac
cgctataagccgatgatcgatgccgatatttttggtgatgtagacaagtcaaagctaagg
caggtaaaaccgaccaacacgccgccaccggcatgggttacatccaacgaccccaagccg
gatatgaacgtacgccgccttaagccacttgaaggccgtgcaccggtaagcactacgcca
atgcccgacagcaagctggttccgggcaatatcgtaatgcacgaacgtttcgggaaaggc
gaggtgctaaacctcgaaggtgtcggtgccgataaaaaagccgagatacgttttgaagta
ggggggataaagaagctattgttacggttcgcgaaactggatattataagttag
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