Flavobacterium album: HYN59_12570
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Entry
HYN59_12570 CDS
T06577
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
falb
Flavobacterium album
Pathway
falb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
falb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN59_12570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
falb03019
]
HYN59_12570
03009 Ribosome biogenesis [BR:
falb03009
]
HYN59_12570
Enzymes [BR:
falb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HYN59_12570
Messenger RNA biogenesis [BR:
falb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYN59_12570
Ribosome biogenesis [BR:
falb03009
]
Prokaryotic type
rRNA helicases
HYN59_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWH85887
UniProt:
A0A2S1QZM8
LinkDB
All DBs
Position
complement(2793091..2794932)
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AA seq
613 aa
AA seq
DB search
MNKFEQLGLNESLLKAINDLGFENPSEVQEKAIPLLLEKDTDIVALAQTGTGKTAAFGFP
LIQKINPENRNTQALILSPTRELCLQITNEIKLYSKYIKGINTVAVYGGASITEQAREIK
RGAQIIVATPGRMQDMINRGLVNISKIDFCILDEADEMLNMGFYDDIVNILSTSPDDKST
WLFSATMPQEVARIAKEFMRKPLEITVGHKNSGSSTVSHEFYLVNARDRYEALKRLADAN
PDIFSVVFCRTKRDTQAVAEKLIEDGYNAAALHGDLSQAQRDSVMKSFRNRQIQMLVATD
VAARGIDVDSITHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIITKSELRKISAIERI
IKQKFEEKTIPSGMEICEIQLFHLANKIKDVEVDHEIDSYLPAIYEVMKDLTKEELIKKM
VSVEFNRFISYYKKNRDLSAQKAGSDRRESFESNSGGSGSGATRYFVNIGSRDNFDWMSL
KDFLRDTLGLGRDDVFKVDVKEGFSFFNTDAEHSQLVLDTLNSMHLEGRRINVEVSKNDG
RDNGGRRDHNGRSGGGSFGRSGGGDRSTDRGARNERRGESFGGGRSGARNQSSSGRPPRR
SDSLSPSRKPRRS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgaacaattaggattgaatgaatcgcttctgaaggcgataaacgatcta
ggatttgagaatccgtcagaagtacaggagaaagcgattcccctcttattggaaaaagat
acagatattgtagcgcttgcgcaaacggggacagggaaaacagcggcattcggttttccg
cttatccaaaaaataaaccctgaaaacaggaacacacaggcacttatactctcacctaca
cgtgagctttgcctccagatcaccaacgaaatcaagctttactccaagtacattaaaggc
atcaataccgttgccgtttacggtggggcgagcattacagaacaggccagggaaattaag
cgcggcgcgcagatcatcgttgctactccgggaaggatgcaggacatgatcaaccgcggg
ctggtaaacatctctaaaatcgatttctgtatccttgatgaggccgatgagatgctgaac
atgggcttttacgatgatatcgtaaacatcctttctacatcgccggacgacaagagcaca
tggcttttctcggctaccatgccgcaggaagttgccaggatcgcaaaagaattcatgcgc
aagccgcttgagattaccgtaggccacaagaactcaggttcgtctaccgtatcgcacgag
ttttaccttgtaaatgcacgcgaccgttatgaggcgcttaagcgtttagctgatgccaac
cccgacattttctcggtagttttctgccgtaccaaaagggacacgcaggctgtcgctgaa
aagcttatcgaggatggatacaacgcagcagcgctgcacggcgacctttcccaggcgcag
cgcgacagcgtaatgaaatcgttccgtaacaggcagatacaaatgcttgtggctaccgac
gttgccgcaaggggtatcgacgttgacagcataacgcacgtggtgaactaccagcttcct
gacgagatagagacttacaaccaccgtagcgggcgtacaggccgtgccggaaaactgggt
acctctatcgtaatcatcactaaaagtgagctacgcaaaatatctgctattgagcgcatt
atcaaacaaaagtttgaggagaaaacaataccttcgggaatggaaatctgtgagatacag
cttttccaccttgccaataaaattaaagatgtagaggttgaccacgagatcgattcctac
cttcctgccatatatgaagtgatgaaagaccttaccaaagaggagcttatcaagaaaatg
gtatcggtagagttcaacaggttcatcagctactacaaaaagaacagggacctttctgcg
caaaaagcaggttcggacagaagggaaagtttcgagtcgaacagcggcggaagcggaagc
ggcgcaacacgctacttcgtgaacatcgggtctagggataacttcgactggatgagcctt
aaagatttccttcgcgatacgcttgggcttggccgtgacgatgtgtttaaagtagatgta
aaagaaggtttctcattctttaatacggatgccgaacactcgcagcttgtgcttgacaca
ctgaacagcatgcaccttgagggccgcaggatcaatgttgaagtttccaagaatgacgga
cgcgataacggcggacgcagggaccacaacggaagaagcggcggtggcagctttggacgc
agtggcggcggcgacaggagtaccgaccgcggcgccaggaatgagcgcaggggcgaatct
tttggcggtggcaggagtggcgcaaggaaccagagttcttcgggacgcccgccaagaagg
agcgattctctatccccttcaaggaagccaagaaggagctaa
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