Flavobacterium album: HYN59_12720
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Entry
HYN59_12720 CDS
T06577
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
falb
Flavobacterium album
Pathway
falb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
falb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN59_12720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
falb03400
]
HYN59_12720
DNA repair and recombination proteins [BR:
falb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN59_12720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN59_12720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
AAA_21
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_18
AAA_33
AAA_15
AAA_22
AAA_23
NACHT
Viral_helicase1
cobW
NTPase_1
DUF87
Motif
Other DBs
NCBI-ProteinID:
AWH85914
UniProt:
A0A2S1QZY7
LinkDB
All DBs
Position
complement(2823083..2825872)
Genome browser
AA seq
929 aa
AA seq
DB search
MIKTDLSTLEPKKNILIKGAQLHNLKNLDVAIPRNKLVVVTGLSGSGKSSLAFDTLYAEG
QRRYVESLSSYARQFLGRLDKPKVEYIKGIAPAIAIEQKVNTTNARSTVGTSTEIYDYLK
LLFARVGRTYSPVSGREVKKHTVTDIINEVKTFEADSRWLLLAPVHTEKGRTIEEKLGVL
LQQGFARILVDNETLRLDELEGVDFSNKEVLLVVDRIVVKDEEEFYNRLADAVQTAFYEG
KGEAYLQQVSTGNRLVYSNNFELDGISFPEPNVHLFSFNNPYGACPSCEGYGSIIGIDEE
LVVPNTALSIYENAIFPWRGESMGWYRDQLVNNSHKFDFPVHKPYFQLSESDRQLVWTGN
KYFTGLNDFFAELEEKNYKIQNRVMLSRYRGKTKCPDCKGKRLRPEANYIKIGGRTISDL
VDLPIKNLAEFFDNLQLNEYDTTVAKRLLVEINSRIRFLQEVGLSYLTLNRRSNTLSGGE
SQRINLATSLGSSLVGSMYILDEPSIGLHPKDTERLIAVLEGLRNLGNTVIVVEHDEDIM
KAADMIIDIGPEAGSFGGELVAQGTYDEILKSDSLTAKYLNGDLEISVPKKRRKFKNHID
VIGARENNLQNIDVTFPLDCLTVITGVSGSGKSTLVKKILFPALQKKLEGVGEKAGQFTE
LQGSYSHIKHIEYVDQNPIGRSSRSNPVTYIKAYDDIRDLFAKQKLSQHRGYQSKHFSFN
VDGGRCDTCKGEGEVTIEMQFMADVHLECETCNGKRFKKEILEITFEGKNIDDVLTMTVD
DAVAFFSEHKQAKIMTKLQPLQDVGLGYVQLGQSSSTLSGGEAQRIKLASFLVKGATKDK
VLFVFDEPTTGLHFHDIRKLLASFEALLDKGHSIIVIEHNLDLIKCADYIIDIGPEGGEN
GGHLVAFGTPEEVAKNSKSVTGEYLLSKL
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgataaagactgatctttcgacattagaaccgaaaaagaatatactcataaaaggcgca
cagctgcacaacctcaagaacctggatgtggctatcccgcgcaacaagctggtggtggtt
accgggctttcgggctccgggaagtcgagccttgcttttgataccctttacgccgaaggc
cagcgccgctacgtggagagcctttcgtcctatgcacgccagttccttggccgcctcgac
aagccaaaggtggaatacatcaagggtattgcccctgctatcgccatcgagcagaaggtg
aacaccaccaacgcccgctcgaccgtgggcaccagcactgagatttacgattatctcaaa
cttctttttgcccgtgtggggcgaacttactcccctgtttcagggcgcgaggtgaagaag
cacaccgtgacggacataatcaacgaggtgaagacttttgaggcggacagccgatggctg
ctccttgcgcccgtgcataccgaaaaaggccgcaccatcgaagaaaagctgggcgtactg
ctgcaacagggctttgcacgtattctggtcgataacgagacattgcgcctggacgaactg
gagggcgttgacttttcaaacaaagaagtgcttttggttgtcgaccgtatcgtggtgaag
gacgaggaggaattttacaaccgccttgccgatgctgtgcagacggccttttacgaaggc
aagggagaagcctacctgcagcaggtgtcaaccggcaaccgccttgtttacagcaataat
tttgagttagatggtataagctttccggagccgaacgtgcaccttttcagctttaataac
ccgtatggtgcgtgtccgagctgcgaaggctacggcagcattatcggtattgatgaagaa
ttggtggttccaaacactgcgttgtccatctatgaaaatgcaattttcccgtggcgcggc
gaaagtatgggctggtaccgcgaccaattggtgaacaacagccacaagtttgattttccg
gtgcacaagccctatttccagctatcggaaagcgacaggcagctggtatggacaggcaac
aaatactttaccgggctcaacgatttctttgctgagcttgaagaaaaaaactataaaata
caaaaccgcgtgatgctttcgcgctaccggggcaagaccaaatgccctgattgcaaaggc
aagcgcctgaggccggaagccaattatattaagatcggcggacgcaccataagtgatctg
gtagaccttccaataaagaatcttgccgagttttttgataacctccaacttaatgaatat
gatactacggtggccaagcgccttttggtggagatcaacagccgcatacgctttttacag
gaggttgggcttagctacctaacgctaaaccgccgttccaatacgctttcgggcggggag
tcgcagcgcatcaacctggcgacatcgctgggcagcagtcttgtaggctcgatgtatatc
ctcgacgaaccgagcatcggcctgcatcctaaagacaccgaaaggctcattgcggtgctc
gaaggcctgcgcaacctgggcaacaccgttattgtggtggagcacgacgaggacatcatg
aaggccgccgacatgatcatcgacatcgggcctgaagcgggttcgtttggtggggagctt
gtggcgcagggcacgtatgatgagatactgaaatctgattcgcttaccgcgaaatacctc
aacggcgaccttgagatttccgtaccgaaaaaacgccgcaagttcaagaaccatatcgac
gtgatcggcgcgcgggagaacaatctgcaaaatatcgacgtaacgttcccgttggactgc
cttaccgtgatcacgggtgtttcgggcagtggcaagagtacgctcgttaagaaaatattg
tttcctgcattgcaaaagaaactggaaggtgtaggcgaaaaggcagggcagttcaccgaa
ttgcagggcagctacagccacataaagcatattgagtacgtagaccagaacccgatagga
cgcagctcgcgttccaatccggtgacgtacattaaggcgtatgacgatatccgcgacctg
ttcgcaaagcagaaattatcccagcacaggggctaccaaagcaagcatttctcctttaac
gtagatggcgggcgttgcgatacctgtaaaggcgaaggcgaagtgaccatcgagatgcag
ttcatggccgacgtgcacctcgagtgcgagacctgcaatggcaagcgttttaagaaagaa
atactcgaaataacgtttgaaggcaagaatatcgacgacgtgctgaccatgacggtagac
gatgccgtagcattcttcagcgagcacaagcaggccaagatcatgaccaagttgcagcca
ttgcaggatgtcggccttggatatgtgcagttggggcagtcctcctctaccctttcgggc
ggtgaggcgcagcgtatcaagctggcatcatttcttgtaaaaggtgcgaccaaagacaaa
gtgctttttgttttcgatgagcctacaaccggccttcactttcatgatatcaggaagtta
ttggcctcatttgaagcactgcttgacaaagggcattccatcatcgtgatcgagcacaac
cttgacctcatcaagtgtgccgactacatcatcgacatcggccctgaaggcggtgagaac
ggcgggcacttagtggcattcgggacaccggaggaagtggcgaagaatagtaagagtgtt
acgggggagtatttactctctaagctctaa
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integrated database retrieval system