Flavobacterium album: HYN59_12890
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Entry
HYN59_12890 CDS
T06577
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
falb
Flavobacterium album
Pathway
falb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
falb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYN59_12890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
falb03400
]
HYN59_12890
DNA repair and recombination proteins [BR:
falb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYN59_12890
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN59_12890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_25
AAA_22
AAA_15
AAA_23
Viral_helicase1
T2SSE
cobW
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AWH85948
UniProt:
A0A2S1QZW0
LinkDB
All DBs
Position
complement(2856155..2858995)
Genome browser
AA seq
946 aa
AA seq
DB search
MPDTTEFTEYIEVLGARAHNLKNIDVIIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRY
IETFSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTGKSPRSTVGTITEIYDFLRLLYA
RGADAYSYNTGEKMVSYTDDQIRELIVEKFDGKRITILAPIIRSRKGHYRELFEQISKQG
FLKVRVDGEIKDIESGMKLDRYKTHDIETVIDRMAVDTSAETDTRLANSIKTAMYHGEDV
MMVIEQESGEARYYSRNLMCPSSGISYPNPEPNNFSFNSPKGACDYCNGLGVINEINIKK
IIPDPKVSIKKGGIVPIGEYKSSWIFKQIEIIGEKFDFKITDPIEKISAEAMEMILNGGK
EKFTVSSKTLGVNREYKIDFEGISSFIRNQHDESGSASIKRWAKEFMDEVECPVCHGSRL
KKESLYFKVNGQNIAELSAMDISDLAEWFENLNENLSEKQKTIASEIVKEIKARLSFLVD
VGLNYLSLNRSSRTLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLIKSLE
QLRDIGNSVIVVEHDKDMIERADYVIDIGPAAGRFGGQIVSKGTPAELLQEHTLTAAYLN
GEKEIAVPKKRREGNGKTLKLTGATGNNLKNVSIELPLGKLICVTGVSGSGKSTLINETL
YPILNAHFFNGVKKPAPYKKIEGLEHIDKVIDIDQSPIGRTPRSNPATYTDVFSEIRSLF
TQTPEAMIRGYKPGRFSFNVSGGRCETCEGSGLRVIEMNFLPDVYVECETCQGKRFNRET
LEIRYKGKSISDVLDMTVDDAVPFFENIPKIYRKIKTIQDVGLGYITLGQQSTTLSGGEA
QRIKLATELSKKDTGNTFYIMDEPTTGLHFEDIRVLMDVINKLVDKGNTVLIIEHNMDVI
KLADYIIDIGYEGGKGGGQLVAKGTPEEVTKNKKSYTAHFLKKELS
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgccagatactacagaatttacagaatatatagaagtactgggtgcccgcgcccacaac
cttaaaaacatagatgtcataattccccgcgaaaagctagtggtcattaccgggctttcg
ggttcgggaaagtcatcacttgccttcgataccatttacgccgaagggcagcgccgctat
atcgagacattctcggcctatgcgcgccagttcctcggaggcctggaacgaccggatgtc
gataagatagacggactctcccccgtgatcgctattgagcagaaaactactggcaaaagt
ccgcgttcgactgtaggtaccattaccgagatatacgacttcctgcgcctcctgtatgcc
cgtggtgccgatgcctacagctacaataccggcgaaaagatggtgagctataccgacgac
cagatcagggagcttatcgtggagaaattcgatgggaagcgcattaccatcttggcaccg
ataatacgttcacgtaaagggcactaccgtgagcttttcgaacagatatccaagcagggc
ttcctgaaggtgcgcgtggatggcgagataaaagacatagagagcggcatgaagctggat
cgctacaagacgcacgatatcgagacggttattgaccgtatggcagtagacacatctgct
gagactgacacccgtcttgccaatagcattaagaccgctatgtaccatggcgaggacgtg
atgatggtcatagagcaggaaagcggcgaggcacgttattacagccgtaacctcatgtgc
ccgtcatcgggtatatcctaccctaacccggagcctaacaatttttcgttcaactcacct
aagggtgcgtgcgactattgcaacgggctgggcgtgatcaacgagatcaacatcaaaaaa
ataataccggatcctaaggtctccataaaaaagggtggtattgtgcccataggcgaatat
aaaagttcatggatatttaagcagatagagatcattggcgaaaaattcgattttaagata
accgaccccattgagaaaatttcggcggaagccatggagatgatactcaacggcggaaag
gagaaattcactgtttcctccaaaacgctgggggtgaaccgtgaatacaagatcgacttt
gaaggcatctcaagcttcatcaggaaccagcatgatgagagtggatcggcttccatcaag
cggtgggcaaaagagttcatggatgaggtagaatgtcctgtttgccatggttcaaggctg
aaaaaggaatcactgtacttcaaggtaaacggccaaaacattgccgaactatcggctatg
gatatttccgacctcgctgaatggttcgaaaacctgaatgagaacctttctgaaaaacag
aaaaccattgcctctgagatcgtaaaggaaataaaggcgcgcctcagctttttggtagac
gtagggcttaattacctttcgctcaaccgcagctcgcgcacgctttcgggcggcgaggca
caacgcatcaggctggctacacagataggctcgcaattagtcggtgtactttacatcctt
gatgagccaagcatcggcctccaccagagggataatgaaaaacttatcaaatcattagag
caattaagggacattggcaactcagtcattgtggtagagcacgacaaagacatgatagag
cgtgccgactatgtaattgatatcggcccggcggcagggcgtttcggcgggcagatcgtc
agtaagggcaccccggcagaattgctgcaggaacatacgcttaccgcggcttaccttaat
ggcgaaaaagaaattgctgtaccgaaaaaacgccgcgaaggaaatggcaaaaccctgaag
ctaacaggcgctaccggcaacaacctgaaaaacgtttcgatagagctgcccttaggaaag
ctgatatgcgttacaggggtttcaggcagcggaaagtcgacactgataaatgaaacgctg
tacccgatactgaacgcccatttcttcaacggcgtgaaaaaaccggctccatataaaaaa
attgaaggactggagcatattgataaagttattgatatcgaccagtcgcctatcggccgt
acgccaaggtcgaatccggctacctataccgatgtgtttagcgagatacgttcgctgttc
acgcaaacacccgaagctatgatacgcggttacaaaccgggaaggtttagttttaacgtg
agcggtgggcgctgcgagacctgcgaaggttccgggctgcgtgtcattgagatgaacttc
ctgccggatgtttacgtggaatgcgaaacctgccagggtaagcgatttaaccgtgagacg
ctggaaatacgttataaagggaaatctatttcggatgtgctggacatgacggtagatgat
gccgtcccgttttttgaaaatattccaaagatatatcgaaagatcaagacgatacaggat
gtaggccttggttatattaccctcgggcagcaaagcaccacactttcgggtggcgaggcg
cagcgtataaagctggcaacggaactgtctaaaaaggatacaggcaacaccttctatatt
atggacgagcctaccaccgggctgcattttgaggacatccgtgtgttaatggatgttatc
aacaaattggtagataaaggaaatacggtacttatcatcgaacacaatatggacgtgata
aaacttgccgactacatcatagacattggttatgagggtggtaaaggcggagggcagctt
gtcgccaaaggaacgcccgaagaagtgacaaaaaacaaaaaaagctatacagcgcatttt
ctgaaaaaagaactatcttag
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