Flavobacterium album: HYN59_14500
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Entry
HYN59_14500 CDS
T06577
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
falb
Flavobacterium album
Brite
KEGG Orthology (KO) [BR:
falb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
falb03009
]
HYN59_14500
Enzymes [BR:
falb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HYN59_14500
Ribosome biogenesis [BR:
falb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HYN59_14500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_25
TRM5-TYW2_MTfase
TRAM
Methyltransf_11
Methyltransf_15
N6_N4_Mtase
PrmA
PCMT
PabTrmU54_TRAM_dom
FtsJ
Methyltransf_ANTKMT
NagA_C
Methyltransf_4
UPF0020
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
AWH86245
UniProt:
A0A2S1R0T0
LinkDB
All DBs
Position
3174062..3175477
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AA seq
471 aa
AA seq
DB search
MGKRKNTDKIVFDNVAVLDAGAKGVSVAKAPDGKVIFIPNVVPGDVVDVQTFKKRKAYYE
GKAVHFHEYSADRVIPPCQHFGACGGCKWQNMNYDKQLFYKNREVYNHLKRIGKVELPEF
EPIKGSEKQFFYRNKMEFSFSNARWVTEKEVQSGEEIDNRNALGFHIPRMWDKILDITKC
HLQEDPSNMIRNAVRDFANENGLEFFNPREHSGLLRTLMIRTASTGEIMVLIQFFDDNKE
QREMILDFLAHNFPGITSLQYVVNQKANDTLYDQDIILYKGRDYILESMEGLSFSINAKS
FYQTNSDQAYELYSITRDFAGLTGNEVVYDLYTGTGTIAQFVSRKAKKVIGVEAVPEAIA
DAWENAKRNNITNCEFFVGDMKVVFNEEFIATHGKPDVIITDPPRDGMHKDVIDQILRIA
PDKVVYVSCNSATQARDLALMDEKYKVTRVRPVDMFPQTHHVENVVLLEKR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaggaaaaataccgacaagatagtatttgacaatgtggccgtgctggatgcc
ggtgcaaaaggcgtttcggtggctaaggcccctgacggaaaagtgatctttataccaaat
gtagtgcccggcgatgttgtagacgtacagacctttaagaagaggaaagcctactacgaa
ggcaaagcagtgcatttccatgaatattcggcggacagggtaataccgccctgccagcat
tttggcgcatgcggcggctgcaaatggcagaatatgaactatgacaagcagctgttctat
aagaaccgcgaggtgtacaaccacctgaagcgcatcggcaaggtagagcttcctgaattt
gaaccgatcaagggcagtgaaaagcaattcttttaccgcaataaaatggagttctccttc
tcgaatgcccgctgggtaaccgagaaagaagtacagagcggcgaagagatcgataaccgc
aatgcgttgggcttccacattccacgcatgtgggataaaattttagacattaccaaatgc
cacctgcaggaagacccgagcaacatgatacgcaatgctgtgagggattttgccaatgaa
aacggactggaattcttcaacccacgcgagcattcgggattactgcgcacactgatgata
cgcacggcctctaccggcgagatcatggtgcttatccagttctttgacgacaataaggaa
caaagggaaatgatattggatttccttgcgcataatttcccgggcattacctcattgcaa
tatgtggtgaaccaaaaagcgaacgataccctttacgaccaggacattatactctacaaa
gggcgtgactatatactggaatcgatggaaggtctgagctttagcatcaatgccaaatcg
ttttaccagaccaattccgaccaggcgtatgaactatacagcataacccgcgactttgca
gggctgacaggtaatgaagtggtgtacgacctttataccggtaccggtaccatagcgcag
ttcgtatcgcgcaaagccaaaaaagtgataggcgttgaagccgttcctgaagccattgcc
gatgcctgggaaaacgcaaagcgcaataatattaccaattgcgagttctttgtgggagac
atgaaagtagtgttcaacgaggaatttattgccacgcacgggaaaccggatgtgatcata
accgacccaccgcgcgatggcatgcacaaggatgttatcgaccagatattgcgcatcgca
cccgacaaagtggtatacgtaagctgcaactcggccacacaggcgcgcgacctggcactc
atggacgaaaaatataaagttacgcgcgttcgccctgtagatatgttcccacagacgcac
catgtggaaaatgttgtacttttggaaaaaagataa
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