Ferriphaselus amnicola: OYT1_ch0203
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Entry
OYT1_ch0203 CDS
T05631
Name
(GenBank) ATP-dependent Helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
fam
Ferriphaselus amnicola
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fam03019
]
OYT1_ch0203
Enzymes [BR:
fam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OYT1_ch0203
Messenger RNA biogenesis [BR:
fam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OYT1_ch0203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
WHD_HA2
AAA_19
nSTAND3
AAA_23
T2SSE
FtsK_SpoIIIE
nSTAND_NTPase5
AAA_25
NACHT
SLFN-g3_helicase
PhoH
SRP54
Motif
Other DBs
NCBI-ProteinID:
BBE49778
UniProt:
A0A2Z6G8K2
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All DBs
Position
208089..211862
Genome browser
AA seq
1257 aa
AA seq
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MKPVVLSAIAERRLARLNQLTPFEFPADLPVVARREELARAIAENHVVIVCGETGSGKTT
QLPKICLSLGRGVNGVIAHTQPRRVAARTVANRIAHELKSELGGAVGYKVRFNDKVSPDS
CVKLMTDGILLAEIHSDPKLRQYDTIILDEAHERSLNIDFLLGYLKRLLPQRPDLKLIIT
SATLDAERFSKHFGGAPVLQVSGRSYPVEVRYRPLQDTAEGEPEDVPQAVCRALDELSIG
ATGLRGDVLVFLPGEREIRETAEALRKHHPKHVEILPLFSRLSAAEQDRVFKPTNQRRVV
LATNVAETSLTVPNIGYVIDSGLARINRYSIRQKVEQLRIEKIARAAANQRAGRCGRVMS
GICVRLYDEADFAQRAEFTDAEIFRVSLATVILRMASLNLGDIAEFPFIEPPGSRSIADG
YQLLQELAAMDEQRVLTSIGRELSKLPLDPKVARLLLAGRQYQCLTEILIIASALSLQDP
RDRPQERREAADAAHQRFNDERSDFLGYLKIWAWFQQAVQHKKSNRQLADQCRESFLSPL
RLREWHDLHQQLHAQVLEMGLRLNEQPASYEQLHKALLTGLLGNIGMRSVEGMDYLGARG
IKFFIAPNSVLAKKGAKWVMAAELVETHKLYARCVARIEPQWLEEVGAHVIKRHYFDPHW
EKKAAQVAAWERSTLFGLVINPKKRVHYGPMAPEESREVFIRQALVEGEFETRAPFFAHN
QKLIRDIEALEHKARRPDVLVDDELIFAFYAARIPAGIHNGAAFEHWRKEAERENAKLLH
LKKDDLMRHEAAGITTDQFPPQLVMSGVSYALNYHFAPGDKDDGVTLAVPLAFINQVSAT
QCEWLVPGLLADKVTQLLKTLPQKLRRHLVPVPEFAAAFCREVPPSDTPLLQALARYIRQ
QKQLEAPLDAFRLEQLQAHLLMNFRVVDEHGRQLGMSRNFVQLRGELAPKVSPALAKSAH
ENSPRLQAGEGDRGSATRHSTWDFGDFIDTTQITRVGQTITVFNALHDEGDAVTRRIFDT
REEAQAAHRKGLARLFMLALKEQVKFLEKSLPGLQALAMQFMPFGNQQDLLRQILAVTFE
RCCLMEPLPSNEKEFLARSKDAKGRISLVAQEIVRLAAAVLTEHAQAQKALQAAKSHAQA
AQDMRSQLDALLGKTFIERTSYERLQHLPRYLKAINVRLEKLRSNPARDAQQQAQLQPLQ
QQWQRRISAQQGETDPRLEDFFWLMQELRVSLFAQELKTPVIVSVKRLEKALEALGR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgttgtgctgtccgcgatcgctgagcgccgtttggcgcggctgaaccagctc
acgccgttcgagtttcccgccgatctgccggtggtcgcgcggcgagaggagttggcacgt
gctatcgccgagaatcacgtagtgattgtctgcggcgaaaccggctcgggcaagactacc
cagcttcccaagatttgcctgagcctcgggcgcggtgtgaacggtgtcatcgcccacacc
cagccgcgccgagtggcggcgcgcaccgtggccaatcgcatcgcccacgagctgaaaagc
gaactcggcggcgcggtcggctacaaggtgcgctttaacgataaagtctcgcccgacagc
tgcgtcaagctgatgaccgacggcatcctgctggccgaaatccacagcgaccctaaactg
cgtcagtacgacaccatcatcctcgacgaggcccacgagcgctcgctcaacatcgacttc
ctgctcggctacctcaaacgtctcctgccgcagcgccccgacctcaagctcatcatcacc
tcggccacgctggatgcggagcgcttctccaagcactttggtggtgcgccagtgttgcag
gtctccggtcgcagctatcccgtcgaagtgcgttaccgtcccttgcaggacactgccgaa
ggcgagccggaagatgtgccgcaggcggtgtgccgggcgctggatgagttgagtatcggg
gcaactggacttcggggcgatgtattggtgtttctgccaggagagcgcgagatacgcgaa
acggcggaagccttgcgcaagcaccaccccaaacatgtggagatcctgccgctgttctcg
cgcctgtctgccgccgagcaggatagggtgttcaaaccgaccaaccagcggcgcgtggtg
cttgccaccaacgtggccgagacctcgctcaccgtacctaacatcggctatgtgatcgac
tccgggctggcgcgcatcaaccgctatagcatccgccaaaaagtggagcagttgcgcatc
gagaagatcgcccgcgccgccgccaatcagcgtgccgggcgctgcggacgagtgatgagc
ggcatctgcgtgcggctgtacgacgaggcggactttgcccaacgcgccgagttcaccgat
gccgagatattccgcgtctcgctggcgacggtgatcctgcgcatggcatcactgaacctc
ggcgacatcgccgagtttcctttcatcgagccgcccggctcacgttccattgccgatggc
tatcagctcttgcaggaattggcagcgatggatgaacagcgggtgctaacttccatcggt
cgcgaactgtccaagctaccgctcgaccccaaagtggcgcggctgttgctggctggacgg
cagtaccaatgcttgaccgagattctcatcatcgccagcgccttgtcgctgcaagacccg
cgtgaccggccacaggaacggcgcgaggccgccgatgccgcgcaccagcgtttcaacgac
gagcgctccgactttctcggctacctaaaaatctgggcatggttccagcaggcagtgcag
cacaagaaatccaaccgccaactggccgaccagtgtcgtgagagctttttgtcgccgctg
cgcctgcgcgaatggcacgacctgcatcagcagctgcacgcccaagtgctggagatgggg
ctgcgcctcaatgagcagcccgccagctatgagcagttgcacaaggcgctgctcactggc
ttgctgggcaacatcgggatgcgtagtgtggaaggtatggattacctcggtgcgcgcggc
atcaagttcttcattgcgcccaattcggtgctggccaagaaaggcgcaaagtgggtgatg
gcggcggaactggtggagacgcacaagctctatgcgcgctgcgtggcccgcatagagccg
cagtggctggaggaagtcggtgctcatgtgatcaagcgtcactacttcgatccgcactgg
gagaagaaagcagcgcaggtggccgcttgggagcgcagcaccctgttcgggctggtcatc
aaccccaagaagcgcgtacattacgggccgatggcgccagaggaatcgcgcgaggtgttc
atccgtcaggcgctggtcgagggcgagttcgagacgcgcgctccgttcttcgcccacaac
cagaagctgatccgcgacatcgaggcgctggaacacaaagcgcgtcgcccggatgtactg
gtggacgacgagctgatcttcgccttctacgctgcacggatcccggcgggcatccacaac
ggcgcggcgttcgagcattggcgcaaggaagcggaacgcgagaacgctaagttgctgcac
ctgaaaaaagacgacctgatgcgccacgaggcggcaggcatcaccactgaccagttcccg
ccgcagttggtgatgagtggtgtcagctatgcgctgaactaccacttcgcacccggcgac
aaagacgacggcgtgacgctggccgtgccgctggcgttcatcaatcaggtgtcggcgacg
cagtgcgagtggctggtgccggggctgctggctgataaagtgacgcaactgctcaagacc
ttgccgcagaaactgcgtcgccatctggtacctgtccccgagttcgccgccgccttctgc
cgcgaagtgccgccgtcggatacaccgttgttgcaggcgcttgcgcgttacatccgccag
caaaagcaactcgaagcaccgctggatgccttccggctggagcagttgcaagcccacttg
ttgatgaacttccgggtggtggacgagcacggacgacaacttggcatgtcgcgcaacttt
gttcaattgcgcggggaactggcaccgaaagtatcgcctgccttggcaaagagtgcgcat
gaaaactctcctcgcctgcaggcgggagagggggatcggggcagcgcaactcgtcactcc
acctgggatttcggcgacttcatcgatactactcagatcacgcgcgtcggtcagacgatc
acggtgttcaatgccttgcacgatgagggtgatgccgtgactcggcgcatcttcgacact
cgcgaggaagcgcaggccgcccatcgcaaaggcctggcgcggctgttcatgttggcactc
aaagagcaggtgaagttcttggaaaagagcttgcccggcttgcaggcgctggcgatgcag
ttcatgccttttggcaatcagcaggatctgttgcggcagatcctcgccgtgaccttcgag
cgttgctgcctgatggagccgttgccgagtaatgaaaaggaattccttgcccgcagcaaa
gatgccaaagggcggatctcgctggtggcgcaagagattgtgcggctggcggcggcggtg
ttgaccgagcacgcgcaggcgcagaaagcgctgcaagccgccaagtcacatgcacaagct
gcgcaggacatgcgctcccagctcgacgcgctgttgggcaagaccttcatcgaacgtacg
tcctacgagcggctgcaacatctgccgcgctacctcaaggcgatcaacgtgcggttggaa
aagttgcgttccaacccagcccgcgatgcccagcaacaagcacagttgcagcccttgcag
cagcaatggcagcgccgcatctcggcacagcagggcgagaccgatccacgtttggaggat
ttcttctggttgatgcaggagctgcgcgtctcgctgttcgcgcaagaactaaagacgccg
gtgatcgtgtcagttaagcggctggagaaagcgctggaagcgctggggaggtag
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