Ferriphaselus amnicola: OYT1_ch0512
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Entry
OYT1_ch0512 CDS
T05631
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fam
Ferriphaselus amnicola
Pathway
fam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OYT1_ch0512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fam03021
]
OYT1_ch0512
03400 DNA repair and recombination proteins [BR:
fam03400
]
OYT1_ch0512
Enzymes [BR:
fam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OYT1_ch0512
Transcription machinery [BR:
fam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OYT1_ch0512
DNA repair and recombination proteins [BR:
fam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OYT1_ch0512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF211
Motif
Other DBs
NCBI-ProteinID:
BBE50081
UniProt:
A0A2Z6G999
LinkDB
All DBs
Position
521069..522043
Genome browser
AA seq
324 aa
AA seq
DB search
MANNEFLKPRIIDVQNISATKAKVVMEPFERGYGHTLGNALRRILLSSMPGSAPTEVKIA
DVLHEYSTIDGVQEDVVDLILNLKGVVLKQHGTNREVTLHLKKEGQGVVTAGDIEVDADT
EVLNPSHVIAHLTAGGKLDMEIKVEQGRGYVSAISRQVPGETRSVGNIVLDASFSPVSRV
SYAVESARVEQRTDLDKLVIDIETNGAIDPEEAIRSAARILVEQFSVFAALEGTPAPVEK
PKAPKVDPMLLRPVDDLELTPRSSNCLKAQSIHYIGDLIQYTETDLLRTPNLGRKSLNEI
KQVLAEHGLSLGMKLENWPVAAEK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataacgaatttctgaaaccacgcatcatcgacgtccaaaacatctcggccact
aaggccaaagttgtgatggagccgttcgagcgtggctatggacacacgctgggcaatgcc
cttcgtcgtatcctgttgtcctcgatgcctggctctgcgccgaccgaggtcaagatcgct
gatgttctgcacgaatactccaccattgatggtgtacaggaagatgtcgttgacttgatc
ctgaacctcaaaggtgtggtactcaagcagcatggtaccaaccgcgaagtgacactgcac
ctgaagaaagaaggtcagggcgtagtaactgccggtgacatcgaagtggatgctgacact
gaagtgctgaacccatctcacgttatcgctcacctgacagcgggcggcaagttggatatg
gaaatcaaggtcgaacaaggccgtggttacgtttctgcgatctcccgtcaggttcctggc
gagacacgttcggttggtaacatcgttctggacgcttcgttcagtccggtcagccgcgtc
agctacgcagtcgaaagtgcccgcgttgagcagcgtaccgacttggataaactggtgatc
gacatcgagaccaatggcgcgattgatccagaagaggcgattcgctctgcagctcgtatt
ctagtcgagcagttcagcgtattcgctgcgctggaaggcactccggctccggtcgagaag
cccaaggcaccgaaggtcgatcctatgctgttgcgtccagtcgatgatctggaactcaca
ccgcgttcgtccaactgcctgaaggcacaaagcatccattacatcggtgatttgatccag
tacaccgaaaccgacctcctgcgtacccctaatctgggtcgcaagtcgttgaacgaaatc
aagcaagtgctggccgaacatggcttgtcgctgggcatgaagctggaaaactggcctgtc
gccgccgagaagtaa
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