Ferriphaselus amnicola: OYT1_ch1045
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Entry
OYT1_ch1045 CDS
T05631
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
fam
Ferriphaselus amnicola
Pathway
fam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYT1_ch1045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fam03019
]
OYT1_ch1045
Messenger RNA biogenesis [BR:
fam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OYT1_ch1045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
BBE50605
UniProt:
A0A2Z6GBK7
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All DBs
Position
1070885..1071409
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AA seq
174 aa
AA seq
DB search
MIDRDGYRPNVGIILTNAKNQVFWGKRVRQDSWQFPQGGIQHGETPEQAMYRELHEEVGL
HPNHIKILGRTRDWMRYEVPQHWVKREWRGSYKGQKQIWFLLRLVGRDCDVSLRASDHPE
FDAWRWNDYWIEMDSVIEFKREVYCMALNELVRYLPAVRVAGRAESSKRVSSSC
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgatagaccgtgacggttatcgcccaaatgtcggcatcatactgacgaacgctaagaat
caggtattttgggggaagcgggtacgccaagattcgtggcagtttccgcagggtggcatc
cagcacggcgagacgccggagcaagcgatgtaccgcgaactgcacgaagaagtgggtctg
catcctaaccatatcaagattctcggacgcacacgcgactggatgcgttacgaagtgccg
cagcattgggtcaaacgcgagtggcgcggtagctacaaggggcagaaacagatttggttt
ttgctgcggttggtggggcgggactgtgatgtcagtctgcgtgcttccgatcatcccgag
ttcgatgcctggcgctggaatgattactggatcgagatggacagcgtgattgaattcaag
cgcgaggtctattgcatggcgctgaatgagttagtgcgctatttaccggcggtgcgagtc
gctgggcgagctgaatcatccaaacgagtttcaagcagttgctaa
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