Ferriphaselus amnicola: OYT1_ch1794
Help
Entry
OYT1_ch1794 CDS
T05631
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fam
Ferriphaselus amnicola
Pathway
fam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYT1_ch1794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fam03021
]
OYT1_ch1794
03019 Messenger RNA biogenesis [BR:
fam03019
]
OYT1_ch1794
Transcription machinery [BR:
fam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OYT1_ch1794
Messenger RNA biogenesis [BR:
fam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OYT1_ch1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_25
Mor
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBE51327
UniProt:
A0A2Z6GCY1
LinkDB
All DBs
Position
1750866..1752122
Genome browser
AA seq
418 aa
AA seq
DB search
MHLSDLKTKHVTELVEMAVANSIDNANRMRKQDLIFALLKNQAKKGESIFGDGTLEVLPD
GFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIEGEIRTPKDGERYVALVKVDRVN
SEPPENAKNKILFENLTPLFPREPLKLERDIKSEENITGRIIDIVAPIGKGQRGLLVASP
KSGKTVMLQHIAHSISANNPDATLIVLLIDERPEEVTEMTRTVRGEVVASTFDEPATRHV
QVAEMVLEKAKRLVEHKKDVIILLDSITRLARAYNTVIPSSGKVLTGGVDANALQKPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRIYPAINV
NRSGTRKEELLIKADILQRIWVLRKLLYPMDELDAMEFLLDKIKATKNNADFFDSMRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatccgacctcaagaccaagcacgtcactgaactcgtcgaaatggccgtcgcc
aactccatcgacaacgccaatcgtatgcgcaagcaagatctgatcttcgccttgctgaag
aaccaagccaagaagggcgaaagcatcttcggcgacggtacactagaagtgctgccggac
ggcttcggattcctacgttcgccagacacctcatatctggcaggcccagacgacatctat
gtcagccccagccagatccgccgctttaacttgcacacaggcgactcgatcgaaggcgag
attcgcacgcccaaggatggcgagcgttacgtagctctagtcaaggtcgatcgggtcaat
agcgaaccgccagagaacgccaaaaacaagatcctgttcgagaacctgacgccgcttttc
ccaagagaaccgctcaagctggagcgtgatatcaagtccgaggagaacatcaccggacgc
atcatcgacatcgtcgctcccatcggcaagggacagcgcggcttgctggtcgcctcgccc
aagtccggcaagacggtgatgctgcaacacatcgcacactccatttcggcgaacaatccc
gatgcaaccttgatcgtactattgatcgatgagcgccctgaagaggtgacggaaatgacc
cgaaccgtgcgcggagaggtagtcgcctccactttcgacgagcccgccacccgtcacgta
caggtcgctgaaatggtgctggaaaaagccaagcgcttagtcgaacacaaaaaagatgtc
atcatcctgctcgactcgatcactcgcttggcgcgcgcctacaacaccgtcatcccctcc
tccggcaaagtattgaccggcggcgtcgatgccaatgcgctgcaaaaacccaagcgtttc
ttcggcgcggcgcgcaacatcgaagagggaggctcgctgaccatcatcgctaccgcgctg
gtcgataccggcagccgtatggacgacgtgatctacgaagaattcaagggtaccggcaac
atggagatccatctggatcgccgcatggccgagaagcgcatctacccagcgatcaacgtc
aaccgttccggaacccgcaaggaagagctactgatcaaggccgacatcctgcaacgcatc
tgggtgctacgcaagctgctctacccgatggacgaattggacgcgatggaattcctgctc
gacaagatcaaggcgaccaagaacaacgccgacttcttcgattcgatgcgccgttaa
DBGET
integrated database retrieval system
