Ferriphaselus amnicola: OYT1_ch1871
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Entry
OYT1_ch1871 CDS
T05631
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fam
Ferriphaselus amnicola
Pathway
fam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYT1_ch1871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fam03019
]
OYT1_ch1871
03016 Transfer RNA biogenesis [BR:
fam03016
]
OYT1_ch1871
Enzymes [BR:
fam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OYT1_ch1871
Messenger RNA biogenesis [BR:
fam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OYT1_ch1871
Transfer RNA biogenesis [BR:
fam03016
]
Prokaryotic type
tRNA degradation factors
OYT1_ch1871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
Bac_luciferase
KH_2
DUF7801
DUF4342
Motif
Other DBs
NCBI-ProteinID:
BBE51398
UniProt:
A0A2Z6GD02
LinkDB
All DBs
Position
complement(1831989..1834124)
Genome browser
AA seq
711 aa
AA seq
DB search
MSHYKKTITYGKHQLTIETGEIARQASGAVMVSLDDTVVLVTVVGRKDAKPEQDFFPLTV
DYQERTYAAGKIPGGFFRREGRPSEKEILTSRLIDRPLRPLFPEGFYNEVQIVATVMSCD
PQIDADIPAVIGASAALALSGIPFDGPIGAARVGYLNGEYLLNPTADELKTSQMDLVVAG
TDRAVLMVESEAKELSEEIMLGAVVFGHEQMRAVIDAINEMADEVGADAWDWTAPAKDEV
LIARLAELADADLQAAYAVRSKQARTVQVNEINKRVVDTLLAEDETRQKNHVNDMFSALE
AKIVRGQILSGEPRIDGRDTRTVRPITIRTGVLPRTHGSVLFTRGETQALVVATLGSMRD
AQKIDALEGEYTDRFMLHYNFPPYSTGETGRVGTPKRREIGHGRLAKRAIVGVLPSVDEC
GYAMRVVSEITESNGSSSMASVCGGCLSLMDAGVPLTAHVAGIAMGLIKEGNRFAVLTDI
LGDEDHLGDMDFKVAGSDAGITALQMDIKINGITKEIMEVALSQAREGRMHILGLMKTAL
PSPRTDVSDFAPRMLKMKINPEKIRDVIGKGGAVIRAITEETGATVDIDDEGNITISSVS
AEAGNAAQQRILDIVAEVEVGRIYEGPVVKLAEFGAFINILPGKDGLLHISQISSERVEK
VSDYLKEGQVVRVKVLEIDDKGRMKLSLKAVAAEEKAAAEAKAAEDQPAAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcactataaaaaaacaatcacttacggaaaacaccagctgactatcgaaaccggc
gagatcgctcgtcaggcatcgggtgcagtgatggtgagtctggacgacaccgtggtgcta
gtcacggtagttggtcgcaaggatgccaagcctgagcaggactttttcccgctgaccgtg
gattaccaagagcgcacctatgccgctggcaagatccccggcggattcttccgtcgtgaa
ggccgtccttccgagaaagagatcctgacttcccgtttgatcgaccgtccgctgcgtccg
ctgttccccgaaggcttctataacgaagtgcagatcgtggcgaccgtgatgtcctgcgat
ccgcagatcgatgctgatattcccgccgtgatcggcgcatccgctgcgctggcgctgtcg
ggtattccatttgacggtcccattggtgcggcacgtgtgggttacctgaatggcgaatac
ctgctgaatccgacggctgatgagctgaaaacgtcgcagatggatctggttgtagctggt
actgaccgagctgtgctgatggtcgagtccgaagctaaagagctgtccgaagagatcatg
ctgggcgcggtggtgttcggccatgagcagatgcgtgccgtgatcgacgcgatcaatgaa
atggctgacgaagtcggcgcagatgcgtgggactggactgctcctgccaaggacgaagtg
ctgatcgcgcgtttagccgaactggctgatgctgatctgcaagccgcttacgccgtgcgc
tcaaagcaagctcgtaccgtgcaagtcaacgagatcaataagcgtgtggtcgataccttg
ctggccgaagatgaaactcgccaaaagaatcacgtcaatgacatgttcagcgccttggaa
gccaagatcgtgcgcggtcagatcctgagtggcgagccacgcatcgatggccgtgacact
cgcaccgtgcgcccgatcaccattcgtaccggcgtgctgccacgcactcacggttccgta
ttgttcacccgtggcgagacacaagcgctggtggtggcaaccttgggttccatgcgcgat
gcgcaaaagatcgatgcgctggaaggtgagtacaccgaccgcttcatgctgcattacaac
ttcccgccatactccaccggcgaaactggccgtgtgggtacgcccaagcgccgcgaaatc
ggccacggtcgtctagccaagcgtgcgatcgttggcgtgttgcccagtgtggatgagtgc
ggctacgcgatgcgcgtggtgtccgagatcactgaatccaacggttccagctcgatggct
tcggtttgcggcggttgcttgtcgttgatggatgcgggcgtgccgctgactgcacacgta
gccggtatcgctatgggcctgatcaaggagggcaatcgtttcgctgtgctgaccgacatt
ctgggtgatgaagatcatctgggcgacatggacttcaaggtggccggttccgatgcaggt
atcactgcgttgcaaatggacatcaagatcaacggcatcaccaaggagatcatggaagtc
gcgctgtcccaagctcgtgaaggccgtatgcacatcttgggcctgatgaagaccgcgctg
ccatcgccacgcaccgacgtgtctgactttgcaccgcgtatgctcaagatgaagatcaat
ccagagaagatccgtgatgtgatcggcaagggcggcgcagtcatccgcgcgatcaccgag
gaaactggcgcaacggtggacatcgacgacgaaggtaatatcaccatttccagcgtgagc
gccgaagcaggtaatgctgctcagcaacgcattctggacatcgtggccgaagtcgaggtg
ggcagaatctacgaaggccccgtggtcaagctggccgagttcggcgcgttcatcaacatc
ctgccggggaaggatggcctgttgcacatctcgcaaatctccagcgagcgtgtcgaaaag
gtgtctgactacctgaaggaaggccaagtcgtgcgcgtcaaagtgctggaaattgacgac
aagggtcgtatgaagctgagcttgaaggctgtcgcagcggaagaaaaagccgcagcggaa
gccaaagctgccgaagatcaacctgcagcagagtaa
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