Ferriphaselus amnicola: OYT1_ch1873
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Entry
OYT1_ch1873 CDS
T05631
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fam
Ferriphaselus amnicola
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fam03016
]
OYT1_ch1873
Enzymes [BR:
fam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OYT1_ch1873
Transfer RNA biogenesis [BR:
fam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OYT1_ch1873
Prokaryotic type
OYT1_ch1873
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
SH3_7
Motif
Other DBs
NCBI-ProteinID:
BBE51400
UniProt:
A0A2Z6GD96
LinkDB
All DBs
Position
complement(1834550..1835470)
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AA seq
306 aa
AA seq
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MARNYRALDGVLLFDKPLELSSNTALQKVRHLFQADKAGHTGTLDPLATGLLPVCFGEAT
KFSTALLDADKTYLAKAKLGQVTTTGDAEGEVIASHEVTVSEAQVVVALQHFIGEIEQLP
PMHSAIKFQGKPLYEYIRKGETIAREKRRITIYALTLVSFSGDELEFSVRCSKGTYVRTL
AEDIGAHLGCGAHLIGLRRTAIAGLDLVDAVSWPELQAMSAAERDSRVLPVDTLLPNYPS
LTLDVEQTKRLAQGQQLVVSTELPEGKLRLYSADQFIGVGSLNGGRLSPERLSARVAKSA
ANADLT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaattaccgtgcgctggacggcgtattgctgttcgataagcctctggaattg
agctccaataccgcgctgcaaaaggtgcgccacttgtttcaggcggataaggcgggtcat
accggtacgcttgatcctttggcgaccggcttgctgccggtttgtttcggcgaggcgacc
aaattctccactgcgctgttggatgccgataaaacctatctggccaaggccaagctaggt
caggtgacaacgaccggcgatgccgagggtgaagtcatcgctagtcacgaagtgacggtg
agcgaggcgcaagttgtcgtggctttgcagcatttcattggcgagatcgagcaacttccg
ccgatgcacagcgccatcaagtttcagggtaagccgctgtacgagtacatccgcaagggt
gaaacgatagcgcgcgagaagcgtcgtatcaccatatatgcgctgacgctggtgagtttt
tcgggcgatgagctggaattctcagtgcgctgtagcaagggtacgtatgtacgtacgttg
gccgaagatatcggcgcgcatctgggttgcggtgctcatctgatcggtttgcgccgtacc
gccatcgctgggctggacttggttgatgcggtgagttggcctgagttgcaggccatgagc
gcagccgaacgagatagtcgtgtgttgcctgtggatacgctgttgccgaactatccgtca
ttgactttagatgttgagcagaccaagcgtttggcgcaaggtcagcagctcgtagtatcg
acagaactgcccgagggtaagttgcgtttgtatagcgccgatcagttcatcggtgttgga
agtttgaatgggggacgcttgtccccagaacgtctatcagcgcgtgtggcaaaaagtgcc
gcaaatgctgatttgacttga
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