Ferriphaselus amnicola: OYT1_ch1876
Help
Entry
OYT1_ch1876 CDS
T05631
Name
(GenBank) Transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fam
Ferriphaselus amnicola
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fam03021
]
OYT1_ch1876
03009 Ribosome biogenesis [BR:
fam03009
]
OYT1_ch1876
Transcription machinery [BR:
fam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OYT1_ch1876
Ribosome biogenesis [BR:
fam03009
]
Prokaryotic type
rRNA transcription factors
OYT1_ch1876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
RNA_pol_A_CTD
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
BBE51403
UniProt:
A0A2Z6GCP8
LinkDB
All DBs
Position
complement(1838548..1840020)
Genome browser
AA seq
490 aa
AA seq
DB search
MSREVLLLVDVLAREKNVDREVVFGALESALASATKKRFEDEADVRVSIDRNTGEYESFR
RWQVMDDETFETPDLHIKLEQAQKSNPGVQLEEFVEEPLESIDFGRIGAQAAKQVIFQKI
RDAEREQILSDFMERSEHLVSGTVKRLERGNAIVEFGKIEALLPREQMIPKENLRVGDRV
RAYLLRVDRTVRGPQIVLSRVSPEFLVKLFELEVPEIEEGLLEIVAAARDPGSRAKIAVR
THDQRLDPIGTCVGMRGSRVQAVTNELAGERVDIVLWSEDPATNVINALAPADVTSIVVD
EEQHSMDVVVEEESLAQAIGRGGQNVRLASQMTGWELNIMTVEAFEAKSGQETAKVRDLF
IAKLDVDEEVADILVQEGFNTLEEVAYVPLDEMLEIEAFDEATVEELRSRARNALLTAAI
ANEEEVEHHIEDLHKLDGMDDETARILASKDVGTQEALADLDVEELVEMTGMDAERANAL
IMAARAPWFA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgaagttctgttgttggtagatgtcctggcgcgcgaaaagaacgtggatcgg
gaagtggtgttcggtgcgctggagtcggctttggcgtctgccacgaagaagcgtttcgag
gacgaggccgatgtgcgcgtcagtatcgatcgcaacaccggcgagtacgaatcgttccgc
cgctggcaagtgatggacgacgagactttcgagacgccggatctgcacatcaagctggag
caagcgcaaaaatctaatcctggtgttcaactggaagagttcgttgaagagccgttggaa
tccatcgacttcggtcgtatcggtgcgcaagcggccaagcaagtgatcttccaaaagatc
cgtgatgccgagcgcgagcagatcttgagcgacttcatggagcgtagcgagcatctggtg
tccggtacagtcaagcgcttggagcgcggcaatgccatcgttgaattcggcaagatcgaa
gcactgctgccgcgcgagcagatgatccccaaggagaatctgcgcgtcggtgatcgcgtg
cgtgcttatctgctgcgtgtggatcgcaccgtgcgcggcccgcagatcgtgctgtcccgt
gtttcgcccgagttcttggtcaaactgttcgagctggaagtgccggagatcgaagaaggg
ctgctggagatcgtggctgctgcgcgtgatcctggttctcgtgccaagatcgctgtgcgt
acgcacgatcagcgtcttgatccgatcggtacctgcgtaggcatgcgcggttcacgcgtt
caggccgtgactaacgaattggctggcgagcgtgtggacatcgtgctgtggtcggaagat
ccagcgaccaatgtcatcaacgcgctggcacctgcggatgtcaccagcatcgtggtggat
gaagagcagcacagtatggacgtggtggtcgaagaggaaagcttggcgcaggccatcgga
cgcggcggtcaaaacgtgcgtctggccagtcagatgactggctgggaattgaatatcatg
accgttgaggcctttgaggctaagagtggtcaagagacagccaaggtgcgtgacctgttc
atcgccaagctggatgtggacgaggaagtcgccgacattctggtgcaagaaggtttcaac
acgctggaagaagtggcttacgtgccgctggatgagatgctggagatcgaagcattcgac
gaagcaaccgttgaggagttgcgcagccgcgcccgcaatgcactgctgaccgctgcgatc
gccaatgaggaagaagtggaacaccatatcgaagacctgcacaagctggatggcatggac
gacgagactgcacgcatcttggcaagcaaggatgtgggtacgcaggaagcgctggccgat
ctggatgtggaagagttagttgaaatgaccggcatggacgcagaacgcgccaatgcgctg
atcatggcagcgcgcgctccctggttcgcataa
DBGET
integrated database retrieval system
