Ferriphaselus amnicola: OYT1_ch1979
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Entry
OYT1_ch1979 CDS
T05631
Name
(GenBank) ECF RNA polymerase sigma-E factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
fam
Ferriphaselus amnicola
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fam03021
]
OYT1_ch1979
Transcription machinery [BR:
fam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OYT1_ch1979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_38
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
BBE51505
UniProt:
A0A2Z6GE90
LinkDB
All DBs
Position
complement(1938667..1939266)
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AA seq
199 aa
AA seq
DB search
MGDREVDQQLVERTQRGDKRAFELLVAKYQRKLGRLISRFIRDPAEVEDVTQEAFIKAYR
ALPAFRGESAFYTWLYRIGINTAKNYLLASGRRAPTSTPFDAEEAEGFEDAGLLHEVSTP
ENELMSKQVVEVVNASLQQLPDDLRTALTLREIEGLSYEEIASVMNCPVGTVRSRIFRAR
EAIAQNLRPLLGTNKDTRW
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatagggaagtagatcagcaactggtggaaaggacgcagcgcggagataagcgc
gcgtttgagctgctggtcgctaaatatcagcgcaagctggggcggctgatctcgcgcttt
atccgtgacccagcagaagttgaagatgtgacccaggaggcattcatcaaggcgtatcgg
gcattgccggcgtttcgtggtgagagtgcgttctacacatggttgtaccgcataggcatc
aataccgccaaaaactaccttttggcgagtgggcgacgtgctccaacgagtacgcccttt
gacgccgaggaggctgaaggttttgaggatgcggggttgttgcacgaagtcagtacgcca
gaaaatgaactgatgagtaagcaggtggtcgaagtggtgaatgcgtccttgcagcagctc
ccagatgatctgcgtactgcactgaccttgcgtgagattgaaggcttgagttacgaagag
atcgcaagtgtgatgaattgtccggtcggaacggtgcgctcccgcattttccgagctcgc
gaagctattgcacagaatttacgcccattgttgggcaccaataaagatacgaggtggtaa
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