Ferriphaselus amnicola: OYT1_ch2599
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Entry
OYT1_ch2599 CDS
T05631
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fam
Ferriphaselus amnicola
Brite
KEGG Orthology (KO) [BR:
fam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fam03032
]
OYT1_ch2599
03400 DNA repair and recombination proteins [BR:
fam03400
]
OYT1_ch2599
Enzymes [BR:
fam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OYT1_ch2599
DNA replication proteins [BR:
fam03032
]
Prokaryotic type
DNA Topoisomerases
OYT1_ch2599
DNA repair and recombination proteins [BR:
fam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OYT1_ch2599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
BBE52111
UniProt:
A0A2Z6GET8
LinkDB
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Position
complement(2565228..2567702)
Genome browser
AA seq
824 aa
AA seq
DB search
MASNLLVVESPAKAKTLKKYLGKDFEVLASYGHVRDLIPKTGAIDVDNGYAMQYETIARN
AKHVDAIAKAAAEADVVYLAPDPDREGEAIAWHLAELLRAKRGLKNKPLKRVVFHEITQS
AVKEAVANPREILLPLVNAQQARRALDYLVGFNLSPLLWRKIRPGLSAGRVQSPALRLIV
ERELEIEAFRPQEYWTVHLDSQKNTLPFTAKLFQYHGKKVEQLTIGSEAEYRKIFDSLSD
AKLPPKVVKVERRGKQRYAAAPFTTSTLQQEAVRKLGMTSERTMRLAQQLYEGIDIGGGT
VGLITYMRTDSVALANEAVAEIRGYIGDNFAPDYLPKTSPVYKSKTKNAQEAHEAIRPTG
IARTPDSVREFLTVDQARLYEMIWKRTLASQMTPARFDTVSVDIRLGGDTTLFRASGQTL
VFPGFIAVYQEDTDDSTEEDGGKLPPLEEGDVLPQDKLYGEQHFTQPPPRFSEASLVKSL
EEYGIGRPSTYASIISTLQAREYVVLEKKRFQPTDVGRVVNRFLTDHFTRYVDYGFTAQM
EDELDEISEGKRDWIPVLDEFWKGFHQLIGEKKDVDRPGTEILEEACPKCGKPLSKRLGK
RGSFIGCTGYPECDFTRNLSGEVESAEDARKELGTNEEGTLILLLRGPYGPYVQLGEAKE
GDKKKPKRVSWPKELPLEAADLGMALKLLALPREVGLHPESGKKVVVNIGRFGPYIGHDG
AFKSIPKTDSIFTIELARAVELLAQKKDNAATILRDLGVHPDDQKPIEVCDGRYGPYVRH
GKVNATLPKDVTVDELTLSQALELLAAKAAKGKPAKKPARKAKA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaatctgcttgtcgtcgaatcgcccgccaaagccaagacgctgaaaaaatat
ctcggcaaggatttcgaggtgctggcctcttacggccatgtgcgcgatctgatcccgaag
acgggcgcgatcgacgtggataacggctatgccatgcagtacgagaccattgcgcgcaac
gccaagcacgtcgatgccatcgccaaagccgccgccgaagctgatgtcgtctatctggca
cccgacccggaccgcgaaggggaggccatcgcttggcatctggccgagttgctgcgcgcc
aagcgcggactgaagaacaagccgctgaagcgggtggtgttccacgagattacccagagt
gcggtgaaagaagccgtggccaatccccgcgagattctgctgccattggtcaatgctcaa
caggcgcgccgtgcgctggactatttggtgggcttcaacctgtcgccgctgctgtggcgc
aagatacgccccggcttgtcggctggtcgcgtgcaaagcccagcgctgcggctgatcgtc
gagcgcgagctggagatcgaggccttccgcccgcaggaatactggacggtgcatctggat
agccagaagaacaccttgccgttcactgccaagctgttccagtatcacggcaaaaaggtc
gaacaactcaccatcggcagtgaagccgagtaccgcaaaattttcgacagcctgagcgat
gccaagctgccgcctaaagtggttaaggtcgagcggcgcggcaagcaacgctacgcggct
gcgcctttcaccacttcgacgctgcaacaggaagcggttcggaagctgggcatgacctcc
gaacgcaccatgcgtctggcgcagcagttgtacgaaggtatcgacatcggcgggggcacg
gtcggcctgatcacctatatgcgtactgactcggtggcgctggcgaacgaagccgtggcc
gagatacgtggctacatcggtgacaatttcgcgccagactatctgcccaagacttcgccg
gtgtacaagagcaagaccaagaacgcgcaagaagcgcacgaggcgattcgcccgaccggc
atcgctcgcacgccggatagtgtgcgtgaattcctgactgtggatcaggcgcgcctatac
gagatgatctggaagcgcacgctggccagccagatgacgcccgcccgcttcgacaccgtg
agcgtggacatccgcttgggcggcgacaccacgctgttccgcgccagcggccagacgctg
gtgttccccggtttcatcgccgtgtatcaggaagacactgacgacagcactgaggaggac
ggcggcaagctaccgccgctggaagaaggcgatgtgctgccgcaagacaagctctacggc
gaacagcatttcacccagccaccgccgcgcttctccgaagccagcttggtcaagtcgctg
gaagagtacggcatcggccgcccttccacctacgccagcatcatctccactttgcaagcg
cgtgaatacgtggttttggaaaagaagcgcttccagcccaccgacgtcggccgcgtggtc
aaccgcttccttaccgaccacttcactcgctacgtcgattacggcttcaccgcccagatg
gaagacgagctggacgaaatttccgaaggcaagcgtgattggattccggtgctggacgaa
ttctggaaaggtttccatcagttgatcggtgagaaaaaggacgtagatcgtccgggcact
gagattctggaagaggcctgccccaagtgcggcaaaccgttgtccaaacgcttgggcaag
cgcggcagtttcattggctgcaccggctatcccgagtgcgatttcacccgcaatttgagc
ggcgaggtcgagtcggcggaagatgctcgcaaggaacttggaaccaacgaggagggcacg
ctgattctgttgctgcgcggaccttatggcccgtacgtgcaactcggcgaagccaaggaa
ggcgacaagaagaaaccgaagcgagtctcttggccgaaagaattgccgctagaagctgcc
gacctcggcatggcgctcaagctgctggcgctgccgcgcgaagtcggtctgcatcctgaa
tctggcaagaaagtggtggtcaacattggccgcttcggcccttacatcggccacgatggc
gcgttcaagtccatccccaagactgacagcatcttcaccatcgagctggctcgtgccgtg
gaactgctggcgcagaagaaggataacgctgccaccatcctgcgcgatttgggggtgcat
cccgacgaccagaagccgatcgaagtctgcgatggccgctacggcccttacgtccgccac
ggcaaagtcaacgccaccttgcccaaggatgtgaccgtggacgaactcacgctgtcgcaa
gcgttggagctgttggcagcgaaagccgccaagggcaaaccggcgaagaagcccgctcgc
aaagcgaaagcctga
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