Flavobacterium ammoniigenes: GENT5_00100
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Entry
GENT5_00100 CDS
T08752
Symbol
pabC
Name
(GenBank) aminodeoxychorismate lyase
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
fan
Flavobacterium ammoniigenes
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fan01011
]
GENT5_00100 (pabC)
Enzymes [BR:
fan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GENT5_00100 (pabC)
Peptidoglycan biosynthesis and degradation proteins [BR:
fan01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GENT5_00100 (pabC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-ProteinID:
BDB53705
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All DBs
Position
complement(9414..10454)
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AA seq
346 aa
AA seq
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MNIKKSITSVSIVVISALIIYGLIMVRQIFSDNTKFEATEVYVYIPTDSDYEAVKQIVAP
YVNDMDRFDAVANKKKYPNNVKPGKFLFKKGMNSNELINALRINNEVKLSFNNQERLEDF
AGRIGSEIEADSVSLLAAFKDTTFLKENGFNEENVLTMFIPNTYELYWNTTATKFRDKMI
KEYRNFWNEERVAKAKSQGLTPTEATILASIVHKESVKKDERPRIAGVYLNRLHKGILLQ
ADPTVIYAVKKKSNDFKQVIKRVLNKDLQVASPYNTYYSAGLPPGPIAMPDITAIEAVLN
PEKHNYIYFCASVTRFGYHDFAVTQAEHEQNAKKYYNWINSQGVKR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatcaaaaaaagtatcacttcagtaagtatcgttgtaatttccgcattaatcatt
tacggattgattatggtgcgccaaatattttccgacaatactaaattcgaagcaactgaa
gtttatgtctacatcccaaccgattcagattatgaagccgtaaaacaaattgttgctcct
tatgtgaatgatatggatcgatttgatgcagttgcaaataaaaagaagtaccctaacaat
gttaagccaggtaagtttttattcaaaaaagggatgaatagcaacgaattgattaatgca
ttgcgaatcaataatgaagtaaaattatcattcaataatcaagaacgattagaagacttt
gctggacgaataggttctgaaattgaagcggatagtgtttcattactggctgcttttaaa
gacactacctttttaaaagaaaatggttttaatgaagaaaatgtgttgactatgtttatt
cccaatacctatgaattgtattggaatactacggccactaagtttcgcgataaaatgatt
aaagaataccgcaatttttggaatgaagagcgtgttgctaaagccaaatcacaaggtttg
acaccaacagaagcaacaatattagcttcgattgtccataaagaatcggtaaaaaaagat
gaaagacccagaattgcgggggtgtatttgaatcgtttgcacaaaggtattttattgcaa
gccgatcctacggttatttatgctgtgaaaaagaaatccaacgattttaaacaagtaatt
aaacgagtattaaataaagatttacaagtagcctcgccatacaacacttattatagtgca
ggtttacctcctggtccaattgcaatgccggatattacagcaatcgaggcagtgttgaat
ccagaaaaacacaactatatttatttctgcgctagtgtaacacgttttggttaccatgat
tttgccgtaactcaagcggaacatgaacaaaatgcaaagaaatattacaattggattaac
agtcaaggcgtaaaaagataa
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