Flavobacterium ammoniigenes: GENT5_00840
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Entry
GENT5_00840 CDS
T08752
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fan
Flavobacterium ammoniigenes
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fan03032
]
GENT5_00840 (topA)
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_00840 (topA)
Enzymes [BR:
fan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GENT5_00840 (topA)
DNA replication proteins [BR:
fan03032
]
Prokaryotic type
DNA Topoisomerases
GENT5_00840 (topA)
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GENT5_00840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Poly_export
Motif
Other DBs
NCBI-ProteinID:
BDB53779
LinkDB
All DBs
Position
complement(96777..99293)
Genome browser
AA seq
838 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFQVESSYGHIADLPSKEIGVDVENGFKPKYEVSADK
KALVSKLKTLSKNAEMVWLASDEDREGEAISWHLSEELKLDKKKTKRIVFHEITKTAILK
AIDNPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EIQNFKPVASYSVTAEFTNEAGKTVKAKLPKNFNTKKEAEDFLNKNIGSTYKVGELETKP
TKKSPTGPFTTSTLQQEAARKLYFPVGITMQLAQRLYEAGLITYMRTDSVNLSKEAMEAA
QAEIIKSYGKEFSKPRTFTNKSKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMSDAELERTNVKIEADNHSEVFTASGEVLLFEGFLKVYLEGNDEDDEEQEGMLPALK
VNERLDNNFITATERYSRPAARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGN
LDGQERKYTQLILQSGKLAEKVLKENTGSDKGKLVPTDIGTIVTDFLVKNFGAILDYNFT
AKVEQDFDEIAEGNIEWAKMMQEFYDKFHPNVKDVEANADRESGERILGTDPATGKPVSV
RLGKFGPMAQIGDAEDEDKKFASLKIDQNIGNISLEDALNLFLLPKNLGLYKGEEVEVSN
GRYGPYVRHGAAFISLPKGEDPLDVSMERAQELIDEKAQADAPIAIYKGLGVQKGVGRFG
AFIKWDGLFINVSKKYNFDNLSQEDIEELIEDKLQKNIDKVIHNWSEEGIIVEKARWGRS
VITKGKIKIELSKDVDASKLTLEAVQELIAKKTPAKKAPAKKATAKKTTTKKTTAKKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagttatagtggaatcacctgcaaaggctaagacaatcgaaaaattt
ttaggaagtgactttcaagttgaatcaagttatggccatattgccgacttgccttccaaa
gaaattggagtagatgttgaaaatggtttcaaacctaaatatgaagtttctgccgacaaa
aaagcgctggttagtaaactaaaaaccttatccaaaaatgccgaaatggtttggttggct
tccgatgaggaccgtgagggagaagccatttcttggcacttatccgaagaattaaaatta
gacaaaaagaaaacaaaacgtatagtttttcacgaaattacaaaaacagctattcttaaa
gcgattgacaatcctcgcgaaattgactataatttagtcaatgcgcaacaagcacgtcga
gttttagaccgtttagtagggtatgaattgtcgccagttttatggagaaaagtaaaaggc
ggactttcagcaggtcgtgtacaatcggtttcggttcgtttgattgtagaacgcgaacgc
gagattcaaaacttcaaacccgtagctagttattctgtaaccgctgagtttactaacgaa
gctggaaaaacagtaaaggcgaaattgcctaaaaatttcaatactaaaaaagaagcggaa
gatttcttgaataagaatattggttccacctataaagtaggagagttagaaacaaaacct
actaaaaaatcacctactggaccttttaccacttctactttacaacaagaagcagcacgt
aaattgtatttccctgttggaattactatgcaattagcgcaacgtttatatgaagcaggg
ttaattacttacatgagaaccgatagtgtgaacttgtcgaaagaggccatggaggcagct
caggcagagattattaaatcgtacggaaaagaattttccaaaccacgcacatttacaaac
aaaagcaaaggcgctcaagaggctcacgaagcaattcgtccaaccgatatgtcgcgtcat
acggtgaacattgatagagatcaagcccgtttgtatgatttgatttggaaacgaactttg
gcttcgcaaatgagtgatgctgaattggaacgtaccaatgtgaaaattgaagcagacaat
cacagtgaagtattcaccgcttctggcgaagtattactttttgaagggttcttaaaagtg
tatttggaaggaaatgatgaggatgatgaagaacaagaaggaatgttgccagcgttgaaa
gtaaacgaacgtttagacaataatttcattacggctaccgaaagatattctagacctgcg
gcgagatacaccgaagcatctttggtgaaaaaattagaagaattgggaattggtcgtcct
tctacttatgcaccaacgatttctaccattatcaacagaaattatgttgaaaaaggaaac
cttgacggtcaagaaagaaaatacacgcaactgattttgcaatcaggtaaactagctgag
aaagtgttaaaagaaaacaccggatcagataaaggtaaattagttcctacagatattgga
accatcgttaccgatttcttggttaaaaatttcggagctattttagattataattttacg
gcaaaagtagagcaagattttgacgaaattgccgaaggaaatattgaatgggctaagatg
atgcaggaattctacgataaatttcaccccaatgtgaaagatgtagaggctaatgctgat
agagaaagtggcgagagaatattaggtacggatccagcaactgggaaaccggtttctgtt
cgtttaggaaaatttggaccgatggcacaaattggcgatgctgaagatgaagacaagaaa
tttgccagtttaaaaatcgatcagaatattggaaatattagtttagaagatgctttgaat
ttgtttttattgcctaaaaatttagggctgtacaaaggagaagaagttgaggtgagtaat
ggacgttacggaccatacgttcgtcacggagcggcttttatttcgttgccaaaaggcgaa
gatcctctagatgtttctatggaaagagcccaagaattaattgacgaaaaagctcaggct
gatgcgccaattgctatctataaaggattgggcgtacaaaaaggagtgggtcgttttggt
gcttttatcaaatgggatggcctttttattaatgttagtaagaaatacaattttgacaac
ttatctcaagaagatattgaagaattgattgaagataaattgcaaaaaaatattgataaa
gtaattcataattggtctgaagaaggaattattgtagaaaaagcccgttggggtcgctcg
gtaattacaaaaggtaaaatcaaaattgaattgagcaaagacgtggatgcaagcaaattg
actttggaagcagtacaagaactgattgcgaagaaaaccccggccaaaaaagcacccgct
aaaaaagctactgcaaaaaagactactacaaaaaagactactgcaaaaaagaaataa
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