Flavobacterium ammoniigenes: GENT5_02720
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Entry
GENT5_02720 CDS
T08752
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fan
Flavobacterium ammoniigenes
Pathway
fan03030
DNA replication
fan03410
Base excision repair
fan03420
Nucleotide excision repair
fan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GENT5_02720 (polA)
03410 Base excision repair
GENT5_02720 (polA)
03420 Nucleotide excision repair
GENT5_02720 (polA)
03440 Homologous recombination
GENT5_02720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fan03032
]
GENT5_02720 (polA)
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_02720 (polA)
Enzymes [BR:
fan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GENT5_02720 (polA)
DNA replication proteins [BR:
fan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GENT5_02720 (polA)
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GENT5_02720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GENT5_02720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDB53967
LinkDB
All DBs
Position
329493..332321
Genome browser
AA seq
942 aa
AA seq
DB search
MSAKKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLMDVIKREKPDHLAV
AFDKGGSDLRNDIYPEYKAHRDATPEAIKIAVPYIQELLRAMHIPIIEVKGYEADDLIGT
IAKQAEKQNYQVFMVTPDKDFAQLVSENIFMYKPARMGNGIEIWGIPEVLAKFEIDRPEQ
VIDFLGMMGDAADNIPGLPGVGEVTAKKLLKEFGSMENLLANTDKLKGKMKDNIEANKEK
GLLSKTLATILLDCPVQFNETDYKLSTPDVEKTDALFNELEFRRMADQFDAIFKKGETAP
VVDDSKLYKKPQPKTEEQFDLFGSAIDEGSEETRHQYYNTLENTTHSYQIIQGDLGIKLL
LQNLQNQTSVCFDTETTGLDALHAELVGISFSYEKGKGFYIPFPENQAEAQSLVEKLIPF
FENENIEKIGQNLKYDLKVLSNYGITVKGKLFDTMIAHYLINPDMRHNMDILSETYLKYA
PQSIEVLIGKKGKNQKSMREVPLEEIKEYAVEDADVTLQLAEIFNTELDKTHTKKLFEEI
EIPLVTVLASMEKEGINLDVPFLNSLSKELGDDIAKLESRIYEIAGEKFNLASPKQLGDI
LFDKLKIGGAKQKKTKTGQYATGEEILSYLAKDNEIVSAILDWRSLIKLQNTYVEALPLQ
VDAKTHRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFIARDENYTLLSADY
SQIELRIIAALCGEENMIKAFQQGEDIHKSTAAKVFNVPLEEVTKEQRSHAKTVNFGIIY
GVSAFGLSNQTSLSRAESAALIEAYYITYPKLKSYIQEQIESARENGFVQTILGRRRYLK
DINSANAIVRGAAERNAVNAPIQGSAADIIKIAMINIHKRLIAENWKSKMLLQVHDELVF
DVHNSELEKIQPMIKQEMEQAVVLSVPLEVEIGIGKDWLEAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaaaaacgccttttccttcttgatgcctacgccctaatttttagaggttat
tatgcctttataaaaaatcctagaataaactcaaaagggatggacacctctgctatcatg
ggatttatgaattccttgatggatgtcattaaaagagaaaaaccagatcatttggccgta
gctttcgacaaaggagggagcgatttgcgaaacgacatttacccagaatacaaagcccat
cgcgatgctacacctgaagccatcaaaattgcagtaccttatatacaagaattgttgcgc
gcaatgcacatccctattatagaggtaaaaggatatgaagcagacgacttaattggaacc
attgccaaacaggctgaaaaacaaaattaccaagtttttatggtgactccagataaggat
tttgcacaattggtgtctgaaaatattttcatgtacaaacctgctcgtatgggtaacgga
atcgaaatttggggcatcccagaagtattggcaaaatttgaaatagacagacccgaacaa
gtgattgattttcttggaatgatgggcgacgcagccgataatattccgggattgccaggt
gtaggagaagttactgctaagaaattattgaaagaatttggttctatggaaaacttgttg
gccaacaccgacaagctgaaaggaaaaatgaaagataatattgaagccaataaggaaaaa
gggcttttatctaagaccttagcaacaattttattagactgtccagtccaatttaacgaa
accgactataaattgtctacccctgatgtagagaaaacagatgcattatttaacgaattg
gaatttcgaagaatggccgatcaatttgacgccatctttaaaaaaggagaaactgctccg
gtagttgacgattccaaattatacaaaaaaccacaacccaaaacggaagaacaatttgac
ctttttggaagtgctatcgatgaaggttcagaagaaacgcgccaccaatattacaatacc
ttagaaaacacaacccattcgtaccaaattattcaaggcgatttagggattaaattgtta
ttgcaaaatttacaaaatcaaacatcggtttgttttgataccgaaaccacaggacttgat
gctttgcacgcagagttagttggaatttcattttcatatgaaaagggaaaagggttttat
attccgtttccagagaaccaagcggaagcgcaatctttggttgaaaaattaattccgttt
tttgaaaatgaaaacatcgaaaaaattggtcagaatttaaaatacgacttaaaagtattg
tctaattatggtatcactgttaaaggaaagttatttgacaccatgattgcacattatttg
atcaaccctgacatgcgccataatatggatattttatccgaaacctatttgaaatatgcg
ccgcaatctattgaagtgctgattggtaagaaaggaaaaaatcaaaaatcgatgcgggag
gttcctttggaagaaattaaagaatatgccgttgaagatgctgatgtaaccttgcaactt
gcagaaattttcaacaccgaattagacaaaacacatactaaaaaactatttgaagaaatt
gaaattccattggttactgttttggccagcatggaaaaagaaggaatcaatttggatgtt
ccttttttgaattcattatctaaagaattaggagacgatattgccaaattagaaagtcgc
atttatgaaatagcaggcgagaaattcaatttggcttcgccaaaacaattgggagatatt
ttatttgacaaattgaaaattggtggcgccaaacaaaagaaaaccaaaacgggtcaatac
gcaacaggggaagaaatcttaagttatttggccaaggacaacgaaattgtaagtgccatt
ttagattggcgctcgttaatcaaattacaaaatacgtatgtcgaagcattgccattgcaa
gtagacgccaaaacgcatcgcgttcataccgattatatgcaaaccgttgccgctacaggt
cgtttgagttcaaataatccgaatttgcaaaacattcctattcgaaccgaacgcggaaga
caaattagaaaagcatttattgcaagggatgaaaactatactttactctctgccgattat
tcgcaaatagaacttcgaattattgcagcattgtgtggagaagaaaatatgatcaaagct
tttcaacagggcgaagacattcataaaagtaccgctgccaaagtatttaatgtaccttta
gaagaagtaactaaagaacaacgtagtcatgctaaaacggttaacttcggaattatatat
ggtgtttcggcatttggattaagtaatcaaacttcgctttctcgcgcagaaagtgccgcc
ttgatcgaagcgtattacattacttatccaaaactaaaatcctacattcaggagcaaata
gaaagcgctagagaaaatggttttgtacaaactattttaggacgtagacgttatttaaaa
gacatcaactcggccaacgccattgtgagaggtgccgcagagagaaatgcggtaaacgcc
ccaattcaaggaagcgctgccgatattataaaaatagcgatgatcaatattcacaaaaga
ttaattgctgaaaattggaaatcaaaaatgcttttgcaagtacatgacgaattggtattt
gacgttcacaacagtgaattggaaaaaatccaaccgatgatcaaacaggaaatggaacaa
gcggtggttttaagtgttcctttagaagtggaaattggaataggaaaagattggctagaa
gcccattaa
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