Flavobacterium ammoniigenes: GENT5_03080
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Entry
GENT5_03080 CDS
T08752
Symbol
hupA
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
fan
Flavobacterium ammoniigenes
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fan03032
]
GENT5_03080 (hupA)
03036 Chromosome and associated proteins [BR:
fan03036
]
GENT5_03080 (hupA)
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_03080 (hupA)
DNA replication proteins [BR:
fan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GENT5_03080 (hupA)
Chromosome and associated proteins [BR:
fan03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GENT5_03080 (hupA)
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GENT5_03080 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HTH_19
PqqD
DUF4777
Motif
Other DBs
NCBI-ProteinID:
BDB54003
LinkDB
All DBs
Position
complement(366275..366613)
Genome browser
AA seq
112 aa
AA seq
DB search
MQTQKNSTTFYKLGKKMTKADIVAKISEKLGLEKGDVQATVETFMNEVKTSLETGDNVYL
RGFGSFIVKTRAEKTGRNISKNTTIKIPAHNIPAFKPAKVFVEGVKINNEAK
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaactcaaaaaaatagtacaacattttataaattaggaaagaaaatgacgaaagca
gatatcgtagcgaaaatttcagagaaattaggtctagaaaaaggagatgttcaggcaact
gtagaaacttttatgaatgaagttaaaacttcattagagactggagataacgtatattta
agaggttttggaagttttatcgtaaaaacaagagctgaaaaaacaggtagaaacatttca
aaaaacacaaccataaaaattcctgctcacaatattcctgcttttaaaccggcaaaagtt
tttgtagaaggcgtaaaaatcaataacgaagcaaaataa
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