Flavobacterium ammoniigenes: GENT5_03510
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Entry
GENT5_03510 CDS
T08752
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
fan
Flavobacterium ammoniigenes
Pathway
fan02020
Two-component system
fan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GENT5_03510 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GENT5_03510 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fan03021
]
GENT5_03510 (rpoN)
Transcription machinery [BR:
fan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GENT5_03510 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
BDB54046
LinkDB
All DBs
Position
413596..414999
Genome browser
AA seq
467 aa
AA seq
DB search
MKLIQLPTQAFEQRLLEEMNENPALEAGKEEEEYVNDEFETEDYDDYDEAESERVDAEEI
NIDDYLSNDDTPDYKTQTNNYSDDDEDHDAPFAAPISFHQDLINQLNTFILNEDDREIAE
FLVGSIDDMGYIRRSISDIVDDLAFTQAVYTDEKTVERLMHVIHELEPSGVGARDLQECL
LLQLKHKTPTEYIELATDIIENQFDAFTKKHYDKLLQKYNVSNDQLKKAIHEIEKLNPKP
GGSFTGNNKVTENIVPDFAIRIVEGKLELSLNGRNAPSLHVSRDYQEMLQTYKVSKDKST
QQKEAVQFIKQKLDSAKWFIDAIRQRQETLYVTMNAIMHYQEDFFLEGDETKLKPMILKD
IADIVGLDISTISRVANSKYVETPYGTKLIKEFFSEAMKNDQGEDVSTLEIKKILQNVIE
EEDKHKPLPDDQLAEILKEKGYPIARRTIAKYREQLDIPVARMRKKM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaattcagttgccgacgcaagcctttgagcaacgtttattggaagaaatgaac
gaaaacccagcgctcgaagccggtaaagaagaagaggaatatgtaaatgacgagtttgaa
acggaagactatgacgattatgatgaggccgaatcagaacgtgtcgacgccgaagaaatc
aatatcgacgactatttaagcaacgacgatactccggattataaaacccaaactaataat
tacagcgatgacgatgaagaccacgatgcgccttttgcagcaccgattagttttcatcaa
gatttaatcaaccaactcaatacctttattttaaacgaggatgaccgagaaattgcggaa
ttcctggtgggaagtattgacgatatgggctacattcgcagaagcatatctgatattgta
gacgatttggcttttacccaagcggtttacacagatgaaaaaaccgtagaacgcctgatg
catgtgattcacgagttagaaccttctggtgtaggcgcgcgcgatttgcaagaatgtttg
ttgttgcaactcaaacacaaaaccccgaccgaatatatcgagctggctactgatattatc
gaaaatcagtttgatgcctttaccaaaaaacattacgacaaacttttacaaaaatacaac
gtctctaacgaccaactgaaaaaagcaattcacgaaattgaaaaactaaatccaaaacca
ggtggctcttttactggaaacaacaaagtaaccgaaaacattgttcctgattttgctatt
cgaattgtggaaggtaaattggaattgagtttgaatggccgtaatgctccttcgcttcat
gtctctagagactaccaggaaatgctgcaaacctataaagtgtcgaaagataaatcgaca
cagcaaaaagaagcggtgcagtttattaagcagaaattagattcggccaaatggttcatt
gatgcgattcgccaacgccaagaaacgctttatgtaaccatgaatgcgattatgcattac
caagaagacttctttttagaaggcgacgaaaccaagttgaaaccgatgatcttgaaggat
atcgcagatatagttggtttggatatttcgacgatttctcgggtggccaatagcaaatat
gtggaaacgccttatgggactaaattgatcaaagagtttttctcggaagcgatgaaaaat
gatcaaggcgaagatgtttcgactttggaaatcaaaaaaatattacaaaacgtgattgag
gaagaagacaaacacaaaccgctacccgacgatcaattggctgaaattctaaaagaaaaa
ggctatccgattgctcgaagaacgattgccaaataccgcgaacaactagatattcctgtg
gcgaggatgcgaaaaaaaatgtaa
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